CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_058_00049
(
Aquilegia coerulea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Aquca_058_00049
T181217_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_058_00049.1
FAR1
46
136
AFYDEYARRLGFVMRVMSCRRSEVDGRILSRRLGCNKEGHCVSIRGKFGTVRKPRTSNREGCKAMILIKIEKSGKWIVRKYVRDHNHPLVV
Aquca_058_00049.2
FAR1
46
136
AFYDEYARRLGFVMRVMSCRRSEVDGRILSRRLGCNKEGHCVSIRGKFGTVRKPRTSNREGCKAMILIKIEKSGKWIVRKYVRDHNHPLVV
Links
Other
FAR1
family TFs
Other
Aquilegia coerulea
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.4__2495__AT2G43280.1
Arabidopsis lyrata
fgenesh2_kg.4__2495__AT2G43280.1
N
0.778
AT2G43280
Arabidopsis thaliana
AT2G43280
N
0.778
Bo4g194220
Brassica oleracea
Bo4g194220
N
0.742
Bo4g194230
Brassica oleracea
Bo4g194230
N
0.733
Bra037723
Brassica rapa
Bra037723
N
0.733
Bra037724
Brassica rapa
Bra037724
N
0.758
PK06282.1
Cannabis sativa
PK06282.1
N
0.800
Cagra.3706s0015
Capsella grandiflora
Cagra.3706s0015
N
0.778
Carubv10024069m.g
Capsella rubella
Carubv10024069m.g
N
0.789
Cla017785
Citrullus lanatus
Cla017785
N
0.789
Ciclev10022249m.g
Citrus clementina
Ciclev10022249m.g
N
0.800
orange1.1g030419m.g
Citrus sinensis
orange1.1g030419m.g
N
0.800
Cucsa.242980
Cucumis sativus
Cucsa.242980
N
0.800
Eucgr.A00281
Eucalyptus grandis
Eucgr.A00281
N
0.767
Eucgr.A00087
Eucalyptus grandis
Eucgr.A00087
N
0.767
Thhalv10001648m.g
Eutrema salsugineum
Thhalv10001648m.g
N
0.767
gene21668-v1.0-hybrid
Fragaria vesca
gene21668-v1.0-hybrid
N
0.789
GLYMA06G48170
Glycine max
GLYMA06G48170
N
0.822
GLYMA04G12273
Glycine max
GLYMA04G12273
N
0.822
Gorai.005G128700
Gossypium raimondii
Gorai.005G128700
N
0.800
chr3.CM0047.280.nc
Lotus japonicus
chr3.CM0047.280.nc
N
0.778
cassava45111.m1
Manihot esculenta
cassava45111.m1
N
0.789
cassava19693.m1
Manihot esculenta
cassava19693.m1
N
0.811
MTR_3g006370
Medicago truncatula
MTR_3g006370
N
0.789
POPTR_0017s05820
Populus trichocarpa
POPTR_0017s05820
N
0.811
POPTR_0007s01910
Populus trichocarpa
POPTR_0007s01910
N
0.733
PRUPE_ppa011038mg
Prunus persica
PRUPE_ppa011038mg
N
0.800
29569.m000148
Ricinus communis
29569.m000148
N
0.800
SapurV1A.1606s0030
Salix purpurea
SapurV1A.1606s0030
N
0.800
SapurV1A.3204s0030
Salix purpurea
SapurV1A.3204s0030
N
0.800
TCM_020035
Theobroma cacao
TCM_020035
N
0.811