Cagra.3706s0015 (Capsella grandiflora)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Cagra.3706s0015 T181256_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3706s0015.1.p FAR1 37 127

Links

Other FAR1 family TFs
Other Capsella grandiflora TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N 0.778
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N 0.989
AT2G43280 Arabidopsis thaliana AT2G43280 N 0.989
Bo4g194230 Brassica oleracea Bo4g194230 N 0.900
Bra037723 Brassica rapa Bra037723 N 0.889
Bra037724 Brassica rapa Bra037724 N 0.855
PK06282.1 Cannabis sativa PK06282.1 N 0.889
Carubv10024069m.g Capsella rubella Carubv10024069m.g N 0.978
Cla017785 Citrullus lanatus Cla017785 N 0.922
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.900
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.900
Cucsa.242980 Cucumis sativus Cucsa.242980 N 0.933
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N 0.878
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N 0.878
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N 0.978
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N 0.911
GLYMA06G48170 Glycine max GLYMA06G48170 N 0.878
GLYMA04G12273 Glycine max GLYMA04G12273 N 0.878
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N 0.867
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N 0.833
cassava45111.m1 Manihot esculenta cassava45111.m1 N 0.889
cassava19693.m1 Manihot esculenta cassava19693.m1 N 0.889
MTR_3g006370 Medicago truncatula MTR_3g006370 N 0.867
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N 0.889
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N 0.878
29569.m000148 Ricinus communis 29569.m000148 N 0.867
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N 0.878
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N 0.878
TCM_020035 Theobroma cacao TCM_020035 N 0.867