CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G101600
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.006G101600
T181499_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G101600.1
FAR1
127
212
NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLFDH
Gorai.006G101600.2
FAR1
127
212
NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLFDH
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH92
Arabidopsis lyrata
fgenesh2_kg.390__1__AT5G43650.1
N
0.000
BHLH92
Arabidopsis thaliana
AT5G43650
N
0.000
Bostr.3148s0106
Boechera stricta
Bostr.3148s0106
N
0.000
Bo7g065640
Brassica oleracea
Bo7g065640
N
0.000
Bra027501
Brassica rapa
Bra027501
N
0.000
Bra033690
Brassica rapa
Bra033690
N
0.000
Cagra.11654s0002
Capsella grandiflora
Cagra.11654s0002
N
0.000
Carubv10027730m.g
Capsella rubella
Carubv10027730m.g
N
0.000
evm.TU.supercontig_58.45
Carica papaya
evm.TU.supercontig_58.45
N
0.000
Thhalv10003353m.g
Eutrema salsugineum
Thhalv10003353m.g
N
0.000