CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10003353m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10003353m.g
T051181_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10003353m
bHLH
89
138
RCRLHMMKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDQIGKLE
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH92
Arabidopsis thaliana
AT5G43650
N
0.890
BHLH92
Arabidopsis lyrata
fgenesh2_kg.390__1__AT5G43650.1
N
0.890
Cagra.11654s0002
Capsella grandiflora
Cagra.11654s0002
N
0.887
Carubv10027730m.g
Capsella rubella
Carubv10027730m.g
N
0.887
Bostr.3148s0106
Boechera stricta
Bostr.3148s0106
N
0.878
Bo7g065640
Brassica oleracea
Bo7g065640
N
0.871
Bra033690
Brassica rapa
Bra033690
N
0.871
Bra027501
Brassica rapa
Bra027501
N
0.866