CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb02083
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Eb02083
T181721_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb02083.1.p
FAR1
110
190
DFFNLYSWEIGFGTRYGRSNKNNKGYTTRQDIVCSCEGSPRTKNCASIRTRCKVMIRLLRTSDHGWYISRVSTSHNHKLSE
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_02626
Cicer arietinum
Ca_02626
N
Ca_16293
Cicer arietinum
Ca_16293
N
GLYMA11G14670
Glycine max
GLYMA11G14670
N
GLYMA12G06630
Glycine max
GLYMA12G06630
N
GLYMA13G41261
Glycine max
GLYMA13G41261
N
GLYMA15G04160
Glycine max
GLYMA15G04160
N
GLYMA15G04166
Glycine max
GLYMA15G04166
N
chr3.CM0792.420.nd
Lotus japonicus
chr3.CM0792.420.nd
N
LjSGA_084059.1
Lotus japonicus
LjSGA_084059.1
N
MTR_2g097463
Medicago truncatula
MTR_2g097463
N
MTR_2g097467
Medicago truncatula
MTR_2g097467
N
MTR_2g097473
Medicago truncatula
MTR_2g097473
N
Pm000712
Prunus mume
Pm000712
N
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N