CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J33683
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.J33683
T181875_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J33683.1.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Pavir.J33683.2.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Pavir.J33683.3.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Pavir.J33683.4.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Pavir.J33683.5.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Pavir.J33683.6.p
FAR1
80
172
AFYNEYARRLGFPFRVGRSRRSKGTEEVVVMKRFVCSREGVYKKKQTSPDEATRKRERMSMREGCNAMMEVVRESDHWVVSKLEKAHNHDLGT
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M437DRAFT_58469
Aureobasidium melanogenum
M437DRAFT_58469
N
0.000
M438DRAFT_301524
Aureobasidium pullulans
M438DRAFT_301524
N
0.000
AUEXF2481DRAFT_200600
Aureobasidium subglaciale
AUEXF2481DRAFT_200600
N
0.000
BAUCODRAFT_71670
Baudoinia compniacensis
BAUCODRAFT_71670
N
0.000
DOTSEDRAFT_73340
Dothistroma septosporum
DOTSEDRAFT_73340
N
0.000
estExt_Genewise1Plus.C_120407
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_120407
I
0.000
SEPMUDRAFT_149198
Sphaerulina musiva
SEPMUDRAFT_149198
N
0.000
Mycgr3G21193
Zymoseptoria tritici
Mycgr3G21193
N
0.000