CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN20375
(
Caenorhabditis brenneri
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
CBN20375
T184785_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14292
M01226_2.00
Caenorhabditis briggsae
VAWAACAW
WTGTTWTB
PBM
Lambert et al.(2019)
pTH11445
0.861
1.000
fkh-9
M00663_2.00
Caenorhabditis elegans
NNVWHAAYAN
NTRTTDWBNN
PBM
Narasimhan et al.(2015)
pTH9957
0.861
1.000
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN20375
Forkhead
48
142
RPSLSYKDLIIEAIDRSPEKRLKLNEIYQVIRLLHPYYRHRPDQWGWQNSIRHNLSLHDCFVKLPLKQTSASGVVGHFWTVVPELSDKQTLRRRN
Links
Other
Forkhead
family TFs
Other
Caenorhabditis brenneri
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001979.1
Alligator sinensis
Alligator_sinensis_CCG001979.1
N
ENSAPLG00000003518
Anas platyrhynchos
ENSAPLG00000003518
N
Brh_R007536
Buceros rhinoceros
Brh_R007536
N
ZNF521
Callithrix jacchus
ENSCJAG00000020691
I
ZNF521
Equus caballus
ENSECAG00000006546
N
ZNF521
Gallus gallus
ENSGALG00000015112
N
ZNF521
Gorilla gorilla
ENSGGOG00000027325
I
ZNF521
Homo sapiens
ENSG00000198795
D
ZNF521
Loxodonta africana
ENSLAFG00000013445
I
ZNF521
Macaca mulatta
ENSMMUG00000008600
I
ZNF521
Meleagris gallopavo
ENSMGAG00000010352
N
ENSPANG00000024017
Papio anubis
ENSPANG00000024017
N
Pvit_18187
Pogona vitticeps
Pvit_18187
N
ZNF521
Pteropus vampyrus
ENSPVAG00000015426
N
ENSSHAG00000018217
Sarcophilus harrisii
ENSSHAG00000018217
N
ZNF521
Sus scrofa
ENSSSCG00000003715
N
Tal_R008805
Tyto alba
Tal_R008805
N