CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_07521
(
Verticillium albo atrum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
VDBG_07521
T191532_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_07521T0
GATA
818
836
CTNCGAIETPTWRKIWTQE
VDBG_07521T0
GATA
887
905
VESLLCNPCGIWLAKWKIH
Links
Other
GATA
family TFs
Other
Verticillium albo atrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.10040s0010
Boechera stricta
Bostr.10040s0010
I
Bo1g004750
Brassica oleracea
Bo1g004750
N
Bo4g087160
Brassica oleracea
Bo4g087160
N
Bo9g040950
Brassica oleracea
Bo9g040950
N
Bra027078
Brassica rapa
Bra027078
N
Bra031402
Brassica rapa
Bra031402
N
Cagra.8164s0008
Capsella grandiflora
Cagra.8164s0008
I
Carubv10020457m.g
Capsella rubella
Carubv10020457m.g
I
Thhalv10023503m.g
Eutrema salsugineum
Thhalv10023503m.g
N