CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.10040s0010
(
Boechera stricta
)
Storekeeper
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04504 (DUF573)
IPR007592
Bostr.10040s0010
T338932_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT4G00390
M01085_2.00
Arabidopsis thaliana
NACCGGTCNNNN
NNNNGACCGGTN
PBM
Sullivan et al.(2014)
pTH9305
0.785
0.785
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.10040s0010.1.p
Storekeeper
145
237
FQRLWSEEDEIAVLQGMIDFKGDTGKSPYEDTNGFYEFIKKSISFEVSKNQFMDKIRSLRKKYMGKEGKNGVEPSFVKAHDKKAFELSKFIWG
Links
Other
Storekeeper
family TFs
Other
Boechera stricta
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.2__286__AT1G61730.1
Arabidopsis lyrata
fgenesh2_kg.2__286__AT1G61730.1
I
0.933
AT1G61730
Arabidopsis thaliana
AT1G61730
I
0.901
Cagra.8164s0008
Capsella grandiflora
Cagra.8164s0008
I
0.848
Carubv10020457m.g
Capsella rubella
Carubv10020457m.g
I
0.848
AT4G00390
Arabidopsis thaliana
AT4G00390
D
0.802
Bo9g040950
Brassica oleracea
Bo9g040950
N
0.761
Bra027078
Brassica rapa
Bra027078
N
0.761
Thhalv10023503m.g
Eutrema salsugineum
Thhalv10023503m.g
N
0.761
Bra031402
Brassica rapa
Bra031402
N
0.739
Bra021317
Brassica rapa
Bra021317
N
0.727
Bo8g035460
Brassica oleracea
Bo8g035460
N
0.703