AGOS_AFR237W (Ashbya gossypii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AGOS_AFR237W T191660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DAL80
M00052_2.00 		Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN		 PBM
Badis et al.(2008)
DAL80_2083 		0.838 0.714
DAL80
M07481_2.00 		Saccharomyces cerevisiae
YGATAAG
CTTATCR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1 		0.838 0.714
DAL80
M08564_2.00 		Saccharomyces cerevisiae
VNMGATAD
HTATCKNB		 Misc
DeBoer et al.(2011)
YKR034W_1355 		0.838 0.714
GZF3
M00051_2.00 		Saccharomyces cerevisiae
HGATAAGN
NCTTATCD		 PBM
Badis et al.(2008)
GZF3_2167 		0.838 0.686
GZF3
M01548_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gzf3 		0.838 0.686
GZF3
M07480_2.00 		Saccharomyces cerevisiae
HGATAASN
NSTTATCD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1 		0.838 0.686
GZF3
M08562_2.00 		Saccharomyces cerevisiae
GATAAG
CTTATC		 Misc
DeBoer et al.(2011)
YJL110C_593 		0.838 0.686
GAT1
M00049_2.00 		Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN		 PBM
Badis et al.(2008)
GAT1_2166 		0.823 0.657
GAT1
M01546_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gat1 		0.823 0.657
GAT1
M07478_2.00 		Saccharomyces cerevisiae
NHGATAAG
CTTATCDN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1 		0.823 0.657
GAT1
M08560_2.00 		Saccharomyces cerevisiae
WKTGATWW
WWATCAMW		 Misc
DeBoer et al.(2011)
YFL021W_962 		0.823 0.657
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAS53608 GATA 330 364

Links

Other GATA family TFs
Other Ashbya gossypii TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_3030026 Physcomitrella patens estExt_fgenesh1_pg.C_3030026 I
estExt_fgenesh1_pg.C_330060 Physcomitrella patens estExt_fgenesh1_pg.C_330060 I
estExt_fgenesh1_pg.C_4070009 Physcomitrella patens estExt_fgenesh1_pg.C_4070009 I
fgenesh1_pg.scaffold_191000049 Physcomitrella patens fgenesh1_pg.scaffold_191000049 D
fgenesh2_pg.scaffold_78000088 Physcomitrella patens fgenesh2_pg.scaffold_78000088 I