Bo7g010220 (Brassica oleracea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bo7g010220 T191899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.836 0.972
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.836 0.972
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.825 0.944
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g010220.1 GATA 93 128

Links

Other GATA family TFs
Other Brassica oleracea TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Bo9g126190 Brassica oleracea Bo9g126190 N 0.000
Bra002802 Brassica rapa Bra002802 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
Cucsa.087480 Cucumis sativus Cucsa.087480 N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
MLOC_66537 Hordeum vulgare MLOC_66537 I 0.000
MLOC_72553 Hordeum vulgare MLOC_72553 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
Lus10012927.g Linum usitatissimum Lus10012927.g N 0.000
Lus10034999.g Linum usitatissimum Lus10034999.g N 0.000
mgf019352m Mimulus guttatus mgf019352m N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.Da00789 Panicum virgatum Pavir.Da00789 N 0.000
Pavir.Db01277 Panicum virgatum Pavir.Db01277 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Si006435m.g Setaria italica Si006435m.g N 0.000
Sb10g022130 Sorghum bicolor Sb10g022130 N 0.000
Sb03g031000 Sorghum bicolor Sb03g031000 N 0.000
Traes_7AL_EFD897AFC Triticum aestivum Traes_7AL_EFD897AFC N 0.000
Traes_7DL_1913741A8 Triticum aestivum Traes_7DL_1913741A8 N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
GRMZM2G115721 Zea mays GRMZM2G115721 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000