CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtaC
(
Dictyostelium discoideum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
DDB_G0277589
T192469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaC
M02009_2.00
Dictyostelium discoideum
HMGATCGW
WCGATCKD
PBM
Weirauch et al.(2014)
pTH5525
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.802
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02009_2.00
GATA
39
74
CIFCGTMETPEWRKGPGGHKTLCNACGLHYAKNIKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0220470
GATA
500
535
CIFCGTMETPEWRKGPGGHKTLCNACGLHYAKNIKK
Links
Other
GATA
family TFs
Other
Dictyostelium discoideum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB002570
Biomphalaria glabrata
BGLB002570
I
csin110955
Clonorchis sinensis
csin110955
N
DILT_0000967601
Diphyllobothrium latum
DILT_0000967601
N
EmuJ_001115800
Echinococcus multilocularis
EmuJ_001115800
N
MCOS_0000738101
Mesocestoides corti
MCOS_0000738101
N
T265_07925
Opisthorchis viverrini
T265_07925
N
SSLN_0000174801
Schistocephalus solidus
SSLN_0000174801
N
SCUD_0000094701
Schistosoma curassoni
SCUD_0000094701
N
A_07348
Schistosoma haematobium
A_07348
N
Sjc_0024710
Schistosoma japonicum
Sjc_0024710
N
SROB_0001396601
Schistosoma rodhaini
SROB_0001396601
N
SPER_0000189601
Spirometra erinaceieuropaei
SPER_0000189601
N
SPER_0000337001
Spirometra erinaceieuropaei
SPER_0000337001
N
SPER_0002092701
Spirometra erinaceieuropaei
SPER_0002092701
N
TsM_000040500
Taenia solium
TsM_000040500
N