MTR_3g100050 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_3g100050 T194197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.867 1.000
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.810 0.833
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.810 0.806
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.810 0.778
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.810 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES73139 GATA 200 237

Links

Other GATA family TFs
Other Medicago truncatula TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_17024 Aegilops tauschii F775_17024 I
F775_28711 Aegilops tauschii F775_28711 I
F775_31964 Aegilops tauschii F775_31964 I
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I
AREB3 Arabidopsis lyrata scaffold_502836.1 I
DPBF3 Arabidopsis thaliana AT3G56850 D
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I
Bo4g112690 Brassica oleracea Bo4g112690 I
Bo6g072380 Brassica oleracea Bo6g072380 I
Bo8g091160 Brassica oleracea Bo8g091160 I
Bra003253 Brassica rapa Bra003253 I
Bra007274 Brassica rapa Bra007274 I
Bra007276 Brassica rapa Bra007276 I
Bra014668 Brassica rapa Bra014668 I
Bra016953 Brassica rapa Bra016953 I
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I
Carubv10018770m.g Capsella rubella Carubv10018770m.g I
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I
Ca_08143 Cicer arietinum Ca_08143 I
Ca_23748 Cicer arietinum Ca_23748 I
Cla013878 Citrullus lanatus Cla013878 I
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I
Cucsa.184670 Cucumis sativus Cucsa.184670 I
Cucsa.364380 Cucumis sativus Cucsa.364380 I
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N
GLYMA03G00580 Glycine max GLYMA03G00580 I
GLYMA05G25200 Glycine max GLYMA05G25200 I
GLYMA08G08220 Glycine max GLYMA08G08220 N
GLYMA08G19590 Glycine max GLYMA08G19590 N
GLYMA08G24340 Glycine max GLYMA08G24340 I
GLYMA15G05440 Glycine max GLYMA15G05440 N
GLYMA15G35080 Glycine max GLYMA15G35080 I
GLYMA19G30230 Glycine max GLYMA19G30230 I
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I
MLOC_16096 Hordeum vulgare MLOC_16096 I
MLOC_4554 Hordeum vulgare MLOC_4554 I
MLOC_6534 Hordeum vulgare MLOC_6534 I
LPERR01G30010 Leersia perrieri LPERR01G30010 I
LPERR05G16840 Leersia perrieri LPERR05G16840 I
Lus10008927.g Linum usitatissimum Lus10008927.g I
Lus10028889.g Linum usitatissimum Lus10028889.g I
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I
chr6.CM0314.840.nd Lotus japonicus chr6.CM0314.840.nd N
MDP0000198495 Malus domestica MDP0000198495 I
MDP0000215106 Malus domestica MDP0000215106 I
MDP0000273211 Malus domestica MDP0000273211 I
MDP0000706379 Malus domestica MDP0000706379 I
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I
MTR_3g010660 Medicago truncatula MTR_3g010660 I
MTR_4g094390 Medicago truncatula MTR_4g094390 I
MTR_7g088090 Medicago truncatula MTR_7g088090 I
mgf002556m Mimulus guttatus mgf002556m I
mgf009464m Mimulus guttatus mgf009464m N
mgf011003m Mimulus guttatus mgf011003m I
mgf020385m Mimulus guttatus mgf020385m N
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I
OBART05G21000 Oryza barthii OBART05G21000 I
OBART07G26790 Oryza barthii OBART07G26790 I
OB05G28440 Oryza brachyantha OB05G28440 I
OB07G32300 Oryza brachyantha OB07G32300 I
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I
BGIOSGA000613 Oryza indica BGIOSGA000613 I
BGIOSGA010835 Oryza indica BGIOSGA010835 I
BGIOSGA020087 Oryza indica BGIOSGA020087 I
BGIOSGA026419 Oryza indica BGIOSGA026419 I
OLONG_003399 Oryza longistaminata OLONG_003399 I
OMERI03G14020 Oryza meridionalis OMERI03G14020 I
OMERI05G18990 Oryza meridionalis OMERI05G18990 I
OMERI07G23410 Oryza meridionalis OMERI07G23410 I
ONIVA03G16560 Oryza nivara ONIVA03G16560 I
ONIVA05G21710 Oryza nivara ONIVA05G21710 I
ONIVA07G26520 Oryza nivara ONIVA07G26520 I
OPUNC01G33790 Oryza punctata OPUNC01G33790 I
OPUNC07G25180 Oryza punctata OPUNC07G25180 I
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I
OS01G0813100 Oryza sativa OS01G0813100 I
OS03G0322700 Oryza sativa OS03G0322700 I
OS05G0489700 Oryza sativa OS05G0489700 I
OS07G0686100 Oryza sativa OS07G0686100 I
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I
Pavir.J05672 Panicum virgatum Pavir.J05672 I
Pavir.J34085 Panicum virgatum Pavir.J34085 I
Pavir.J38875 Panicum virgatum Pavir.J38875 I
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I
Pm004043 Prunus mume Pm004043 I
Pm016826 Prunus mume Pm016826 I
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I
29955.m001177 Ricinus communis 29955.m001177 I
30226.m002055 Ricinus communis 30226.m002055 I
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I
Si002173m.g Setaria italica Si002173m.g I
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I
Sb01g036810 Sorghum bicolor Sb01g036810 I
Sb02g043620 Sorghum bicolor Sb02g043620 I
Sb09g023920 Sorghum bicolor Sb09g023920 I
TCM_006432 Theobroma cacao TCM_006432 I
TCM_044596 Theobroma cacao TCM_044596 I
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I
TRIUR3_06726 Triticum urartu TRIUR3_06726 I
TRIUR3_12792 Triticum urartu TRIUR3_12792 I
TRIUR3_24203 Triticum urartu TRIUR3_24203 I
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I
GRMZM2G077124 Zea mays GRMZM2G077124 I
GRMZM2G161009 Zea mays GRMZM2G161009 I