CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.002G207000
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.002G207000
T071891_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.785
0.500
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.785
0.500
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.785
0.500
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.785
0.500
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.785
0.500
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G207000.1
bZIP
203
266
KATQQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEEKARLLREEAELNKARFKQLMENL
Gorai.002G207000.2
bZIP
203
236
KATQQKQRRMIKNRESAARSRERKQVRLSFLKIC
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10002029m.g
Citrus clementina
Ciclev10002029m.g
I
0.885
MDP0000706379
Malus domestica
MDP0000706379
I
0.884
TCM_006432
Theobroma cacao
TCM_006432
I
0.884
PGSC0003DMG400029774
Solanum tuberosum
PGSC0003DMG400029774
I
0.873
Solyc01g104650.2
Solanum lycopersicum
Solyc01g104650.2
I
0.873
mgf009464m
Mimulus guttatus
mgf009464m
N
0.873
Gorai.005G259700
Gossypium raimondii
Gorai.005G259700
I
0.861
GLYMA05G25200
Glycine max
GLYMA05G25200
I
0.859
gene11837-v1.0-hybrid
Fragaria vesca
gene11837-v1.0-hybrid
N
0.857
GSMUA_Achr9G08900_001
Musa acuminata
GSMUA_Achr9G08900_001
N
0.848
GLYMA08G08220
Glycine max
GLYMA08G08220
N
0.843
MDP0000198495
Malus domestica
MDP0000198495
I
0.827
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
0.826
MDP0000208334
Malus domestica
MDP0000208334
N
0.825
GSMUA_Achr10G10440_001
Musa acuminata
GSMUA_Achr10G10440_001
I
0.825
GSMUA_Achr3G22470_001
Musa acuminata
GSMUA_Achr3G22470_001
I
0.823
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
0.821
chr4.CM0337.330.nc
Lotus japonicus
chr4.CM0337.330.nc
I
0.821
Pm004043
Prunus mume
Pm004043
I
0.821
PRUPE_ppa025544mg
Prunus persica
PRUPE_ppa025544mg
I
0.821
Cla000389
Citrullus lanatus
Cla000389
I
0.820
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
0.814
Lus10028575.g
Linum usitatissimum
Lus10028575.g
N
0.814
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
0.810
29955.m001177
Ricinus communis
29955.m001177
I
0.810
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.807
chr6.CM0314.840.nd
Lotus japonicus
chr6.CM0314.840.nd
N
0.806
GLYMA10G36820
Glycine max
GLYMA10G36820
N
0.806
MTR_1g098590
Medicago truncatula
MTR_1g098590
N
0.806
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.805
OS01G0859300
Oryza sativa
OS01G0859300
I
0.805
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
0.805
GRMZM2G168079
Zea mays
GRMZM2G168079
I
0.805
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.805
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.805
OB01G46760
Oryza brachyantha
OB01G46760
I
0.805
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
0.805
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
0.805
OBART01G37980
Oryza barthii
OBART01G37980
I
0.805
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
0.805
OLONG_014546
Oryza longistaminata
OLONG_014546
I
0.805
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
0.804
MLOC_34679
Hordeum vulgare
MLOC_34679
I
0.802
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
0.802
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
0.802
GSMUA_Achr2G20490_001
Musa acuminata
GSMUA_Achr2G20490_001
I
0.802
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
0.802
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
0.802
F775_32479
Aegilops tauschii
F775_32479
I
0.802
MTR_4g094390
Medicago truncatula
MTR_4g094390
I
0.801
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.800
Thhalv10009710m.g
Eutrema salsugineum
Thhalv10009710m.g
N
0.799
SapurV1A.0134s0060
Salix purpurea
SapurV1A.0134s0060
I
0.799
POPTR_0005s21500
Populus trichocarpa
POPTR_0005s21500
I
0.799
SapurV1A.0625s0150
Salix purpurea
SapurV1A.0625s0150
I
0.799
POPTR_0002s06800
Populus trichocarpa
POPTR_0002s06800
I
0.799
Bra015281
Brassica rapa
Bra015281
N
0.798
Cagra.1671s0014
Capsella grandiflora
Cagra.1671s0014
N
0.798
Bo5g004230
Brassica oleracea
Bo5g004230
N
0.798
Carubv10011573m.g
Capsella rubella
Carubv10011573m.g
N
0.798
PGSC0003DMG400023897
Solanum tuberosum
PGSC0003DMG400023897
N
0.797
Pavir.J36143
Panicum virgatum
Pavir.J36143
I
0.797
GRMZM2G132868
Zea mays
GRMZM2G132868
I
0.797
Pavir.J06257
Panicum virgatum
Pavir.J06257
I
0.797
Bra007274
Brassica rapa
Bra007274
I
0.796
Bo8g091160
Brassica oleracea
Bo8g091160
I
0.796
Bra007276
Brassica rapa
Bra007276
I
0.796
BRADI2G21820
Brachypodium distachyon
BRADI2G21820
I
0.796
Bra014668
Brassica rapa
Bra014668
I
0.796
Bo6g072380
Brassica oleracea
Bo6g072380
I
0.796
Bra003253
Brassica rapa
Bra003253
I
0.796
evm.TU.supercontig_33.182
Carica papaya
evm.TU.supercontig_33.182
I
0.796
Bo4g112690
Brassica oleracea
Bo4g112690
I
0.796
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
0.795
GLYMA15G05440
Glycine max
GLYMA15G05440
N
0.792
Bo7g067030
Brassica oleracea
Bo7g067030
N
0.792
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.790
GBF4
Arabidopsis thaliana
AT1G03970
N
0.788
mgf011003m
Mimulus guttatus
mgf011003m
I
0.788
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.788
TCM_044596
Theobroma cacao
TCM_044596
I
0.788
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.788
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.788
fgenesh2_kg.1__328__AT1G03970.1
Arabidopsis lyrata
fgenesh2_kg.1__328__AT1G03970.1
N
0.788
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.788
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.788
GSMUA_Achr11G15610_001
Musa acuminata
GSMUA_Achr11G15610_001
I
0.788
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.788
OS07G0686100
Oryza sativa
OS07G0686100
I
0.787
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.787
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.787
Bra016953
Brassica rapa
Bra016953
I
0.787
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.787
Traes_5DL_73CE92096
Triticum aestivum
Traes_5DL_73CE92096
I
0.787
OBART07G26790
Oryza barthii
OBART07G26790
I
0.787
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.787
MLOC_4554
Hordeum vulgare
MLOC_4554
I
0.787
OB07G32300
Oryza brachyantha
OB07G32300
I
0.787
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.787
Traes_5BL_FB4EDEA83
Triticum aestivum
Traes_5BL_FB4EDEA83
I
0.787
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.787
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.787
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.787
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.787
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.787
Gorai.003G007000
Gossypium raimondii
Gorai.003G007000
N
0.786
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.786
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.785
Pm016826
Prunus mume
Pm016826
I
0.785
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.785
cassava22423.valid.m1
Manihot esculenta
cassava22423.valid.m1
I
0.785
Lus10028889.g
Linum usitatissimum
Lus10028889.g
I
0.785
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.785
Pavir.J38875
Panicum virgatum
Pavir.J38875
I
0.785
BGIOSGA020087
Oryza indica
BGIOSGA020087
I
0.785
SapurV1A.0036s0950
Salix purpurea
SapurV1A.0036s0950
I
0.785
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.785
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.785
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.785
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.785
Pavir.Ib01001
Panicum virgatum
Pavir.Ib01001
I
0.785
Pavir.Eb03523
Panicum virgatum
Pavir.Eb03523
I
0.785
Lus10008927.g
Linum usitatissimum
Lus10008927.g
I
0.785
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.785
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.785
Cla013878
Citrullus lanatus
Cla013878
I
0.785
MDP0000215106
Malus domestica
MDP0000215106
I
0.785
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.785
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.785
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.785
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.785
OS05G0489700
Oryza sativa
OS05G0489700
I
0.785
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.785
ORUFI05G22290
Oryza rufipogon
ORUFI05G22290
I
0.785
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.785
GRMZM2G161009
Zea mays
GRMZM2G161009
I
0.785
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.785
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.785
POPTR_0010s25460
Populus trichocarpa
POPTR_0010s25460
I
0.785
POPTR_0010s25440
Populus trichocarpa
POPTR_0010s25440
I
0.785
POPTR_0008s01130
Populus trichocarpa
POPTR_0008s01130
I
0.785
BRADI2G53060
Brachypodium distachyon
BRADI2G53060
I
0.785
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.785
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.785
LPERR05G16840
Leersia perrieri
LPERR05G16840
I
0.785
OBART05G21000
Oryza barthii
OBART05G21000
I
0.785
OB05G28440
Oryza brachyantha
OB05G28440
I
0.785
MLOC_16096
Hordeum vulgare
MLOC_16096
I
0.785
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.785
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.785
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.785
OMERI05G18990
Oryza meridionalis
OMERI05G18990
I
0.785
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.785
GSMUA_AchrUn_randomG12190_001
Musa acuminata
GSMUA_AchrUn_randomG12190_001
I
0.785
OLONG_003399
Oryza longistaminata
OLONG_003399
I
0.785
Sb01g036810
Sorghum bicolor
Sb01g036810
I
0.785
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.785
F775_17024
Aegilops tauschii
F775_17024
I
0.785
F775_28711
Aegilops tauschii
F775_28711
I
0.785
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.785
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.785
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.785
Ca_08143
Cicer arietinum
Ca_08143
I
0.785
TRIUR3_24203
Triticum urartu
TRIUR3_24203
I
0.785
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.785
F775_31964
Aegilops tauschii
F775_31964
I
0.785
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.785
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.785
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.785
Si002173m.g
Setaria italica
Si002173m.g
I
0.785
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.785
Sb09g023920
Sorghum bicolor
Sb09g023920
I
0.785
30226.m002055
Ricinus communis
30226.m002055
I
0.784
Ca_23748
Cicer arietinum
Ca_23748
I
0.784
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.784
GSMUA_Achr8G21560_001
Musa acuminata
GSMUA_Achr8G21560_001
I
0.784
MTR_3g010660
Medicago truncatula
MTR_3g010660
I
0.784
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.784
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.784
MDP0000273211
Malus domestica
MDP0000273211
I
0.784
GRMZM2G077124
Zea mays
GRMZM2G077124
I
0.784
TRAES3BF001900070CFD_g
Triticum aestivum
TRAES3BF001900070CFD_g
I
0.784
mgf020385m
Mimulus guttatus
mgf020385m
N
0.784
Sb02g043620
Sorghum bicolor
Sb02g043620
I
0.784
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.784
Pavir.J34085
Panicum virgatum
Pavir.J34085
I
0.783
OS01G0813100
Oryza sativa
OS01G0813100
I
0.783
BGIOSGA000613
Oryza indica
BGIOSGA000613
I
0.783
Pavir.J05672
Panicum virgatum
Pavir.J05672
I
0.782
LPERR01G30010
Leersia perrieri
LPERR01G30010
I
0.782