ORUFI05G28920 (Oryza rufipogon)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 ORUFI05G28920 T194548_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.848 0.917
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.848 0.917
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.807 0.861
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.807 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI05G28920.1 GATA 154 189

Links

Other GATA family TFs
Other Oryza rufipogon TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I
PPA08785 Pristionchus pacificus PPA08785 I
PPA10478 Pristionchus pacificus PPA10478 I
SPAL_0001578700 Strongyloides papillosus SPAL_0001578700 N
SSTP_0000309200 Strongyloides stercoralis SSTP_0000309200 N
SVE_0983600 Strongyloides venezuelensis SVE_0983600 N