Sb03g047520 (Sorghum bicolor)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Sb03g047520 T195097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.811 0.833
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g047520.1 GATA 41 76

Links

Other GATA family TFs
Other Sorghum bicolor TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I 0.000
D915_03512 Fasciola hepatica D915_03512 I 0.000
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I 0.000
HmN_000789900 Hymenolepis microstoma HmN_000789900 I 0.000
MCOS_0000437401 Mesocestoides corti MCOS_0000437401 I 0.000
T265_03056 Opisthorchis viverrini T265_03056 I 0.000
PXEA_0003260001 Protopolystoma xenopodis PXEA_0003260001 N 0.000
A_06411 Schistosoma haematobium A_06411 I 0.000
A_07565 Schistosoma haematobium A_07565 I 0.000
Sjc_0130210 Schistosoma japonicum Sjc_0130210 I 0.000
Smp_174320 Schistosoma mansoni Smp_174320 D 0.000
SMTD_0000935101 Schistosoma mattheei SMTD_0000935101 I 0.000
SROB_0000638901 Schistosoma rodhaini SROB_0000638901 I 0.000
TsM_000741200 Taenia solium TsM_000741200 I 0.000