Cucsa.127470 (Cucumis sativus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cucsa.127470 T196048_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.842 0.889
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.842 0.889
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.812 0.861
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.812 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.127470.1 GATA 122 157

Links

Other GATA family TFs
Other Cucumis sativus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00859 Aegilops tauschii F775_00859 I 0.856
F775_42893 Aegilops tauschii F775_42893 I 0.838
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I 0.856
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I 0.856
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I 0.856
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I 0.812
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I 0.842
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I 0.842
GATA20 Arabidopsis thaliana AT2G18380 D 0.812
GATA18 Arabidopsis thaliana AT3G50870 I 0.842
GATA19 Arabidopsis thaliana AT4G36620 D 0.842
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I 0.812
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I 0.842
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I 0.842
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I 0.838
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I 0.856
Bo1g005530 Brassica oleracea Bo1g005530 I 0.853
Bo7g010220 Brassica oleracea Bo7g010220 I 0.812
Bo7g064860 Brassica oleracea Bo7g064860 I 0.842
Bo7g100580 Brassica oleracea Bo7g100580 I 0.842
Bo7g118030 Brassica oleracea Bo7g118030 I 0.842
Bo8g080330 Brassica oleracea Bo8g080330 I 0.842
Bo9g026020 Brassica oleracea Bo9g026020 I 0.807
Bra010563 Brassica rapa Bra010563 I 0.838
Bra011695 Brassica rapa Bra011695 I 0.853
Bra012080 Brassica rapa Bra012080 I 0.812
Bra012883 Brassica rapa Bra012883 I 0.842
Bra017766 Brassica rapa Bra017766 I 0.842
Bra036854 Brassica rapa Bra036854 I 0.842
Bra037221 Brassica rapa Bra037221 I 0.812
Bra039614 Brassica rapa Bra039614 I 0.812
PK24471.1 Cannabis sativa PK24471.1 I 0.842
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I 0.842
Carubv10007612m.g Capsella rubella Carubv10007612m.g I 0.842
Carubv10014541m.g Capsella rubella Carubv10014541m.g I 0.812
Carubv10017765m.g Capsella rubella Carubv10017765m.g I 0.842
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I 0.842
Ca_02038 Cicer arietinum Ca_02038 I 0.842
Ca_16057 Cicer arietinum Ca_16057 I 0.856
Cla014435 Citrullus lanatus Cla014435 I 0.867
Cla014810 Citrullus lanatus Cla014810 I 0.842
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I 0.842
Cucsa.106490 Cucumis sativus Cucsa.106490 I 0.842
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I 0.842
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I 0.812
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I 0.842
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I 0.842
GLYMA02G06320 Glycine max GLYMA02G06320 I 0.841
GLYMA11G07350 Glycine max GLYMA11G07350 I 0.842
GLYMA11G25375 Glycine max GLYMA11G25375 I 0.842
GLYMA16G25370 Glycine max GLYMA16G25370 I 0.842
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I 0.842
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I 0.842
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I 0.842
MLOC_5372 Hordeum vulgare MLOC_5372 I 0.856
MLOC_62522 Hordeum vulgare MLOC_62522 I 0.838
LPERR01G21790 Leersia perrieri LPERR01G21790 I 0.856
LPERR05G21780 Leersia perrieri LPERR05G21780 I 0.856
LPERR05G22620 Leersia perrieri LPERR05G22620 I 0.851
Lus10028301.g Linum usitatissimum Lus10028301.g I 0.842
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I 0.842
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I 0.842
MDP0000253174 Malus domestica MDP0000253174 I 0.842
MDP0000310271 Malus domestica MDP0000310271 I 0.842
cassava21185.m1 Manihot esculenta cassava21185.m1 I 0.842
cassava5664.m1 Manihot esculenta cassava5664.m1 I 0.842
MTR_5g020230 Medicago truncatula MTR_5g020230 I 0.842
MTR_8g077510 Medicago truncatula MTR_8g077510 I 0.820
mgf023982m Mimulus guttatus mgf023982m I 0.842
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I 0.819
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I 0.856
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I 0.856
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I 0.856
OBART01G25510 Oryza barthii OBART01G25510 I 0.856
OBART05G26150 Oryza barthii OBART05G26150 I 0.816
OB01G34710 Oryza brachyantha OB01G34710 I 0.856
OB05G34480 Oryza brachyantha OB05G34480 I 0.856
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I 0.856
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I 0.851
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I 0.851
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I 0.856
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I 0.816
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I 0.851
BGIOSGA001076 Oryza indica BGIOSGA001076 I 0.856
BGIOSGA017544 Oryza indica BGIOSGA017544 I 0.851
GATA15 Oryza indica BGIOSGA020424 I 0.851
OMERI01G23200 Oryza meridionalis OMERI01G23200 I 0.856
OMERI03G30220 Oryza meridionalis OMERI03G30220 I 0.851
OMERI05G23010 Oryza meridionalis OMERI05G23010 I 0.851
ONIVA01G28750 Oryza nivara ONIVA01G28750 I 0.856
ONIVA05G29020 Oryza nivara ONIVA05G29020 I 0.851
OPUNC01G25380 Oryza punctata OPUNC01G25380 I 0.856
OPUNC05G23750 Oryza punctata OPUNC05G23750 I 0.856
OPUNC05G24550 Oryza punctata OPUNC05G24550 I 0.851
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I 0.856
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I 0.851
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I 0.851
OS01G0662800 Oryza sativa OS01G0662800 I 0.856
OS05G0567900 Oryza sativa OS05G0567900 I 0.851
GATA15 Oryza sativa OS05G0578900 I 0.851
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I 0.838
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I 0.838
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I 0.842
Pavir.J03293 Panicum virgatum Pavir.J03293 I 0.856
Pavir.J18346 Panicum virgatum Pavir.J18346 I 0.838
Pavir.J26908 Panicum virgatum Pavir.J26908 I 0.856
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I 0.842
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I 0.842
Pm026628 Prunus mume Pm026628 I 0.842
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I 0.842
29634.m002146 Ricinus communis 29634.m002146 I 0.842
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I 0.842
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I 0.842
Si022366m.g Setaria italica Si022366m.g I 0.838
Si024214m.g Setaria italica Si024214m.g I 0.856
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I 0.842
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I 0.842
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I 0.842
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I 0.842
Sb03g030310 Sorghum bicolor Sb03g030310 I 0.856
Sb09g028850 Sorghum bicolor Sb09g028850 I 0.851
Sb09g029510 Sorghum bicolor Sb09g029510 I 0.838
TCM_000376 Theobroma cacao TCM_000376 I 0.842
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I 0.838
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I 0.856
MNP Vitis vinifera VIT_04s0023g01840 I 0.842
GRMZM2G123909 Zea mays GRMZM2G123909 I 0.856
GRMZM2G138967 Zea mays GRMZM2G138967 N 0.814
GRMZM2G325850 Zea mays GRMZM2G325850 I 0.811