CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgeneshPB_pg.C_70124
(
Phycomyces blakesleeanus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_fgeneshPB_pg.C_70124
T196162_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshPB_pg.C_70124
GATA
232
267
CHSCNISETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Phycomyces blakesleeanus
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RPRC000536
Rhodnius prolixus
RPRC000536
N
0.000
RPRC005679
Rhodnius prolixus
RPRC005679
N
0.000
RPRC008157
Rhodnius prolixus
RPRC008157
N
0.000
RPRC008588
Rhodnius prolixus
RPRC008588
N
0.000
RPRC010437
Rhodnius prolixus
RPRC010437
N
0.000