fgenesh4_pg.C_scaffold_83000006 (Volvox carteri)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 fgenesh4_pg.C_scaffold_83000006 T196228_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
0300010106
M02018_2.00 		Ostreococcus tauri
NNNKATCN
NGATMNNN		 PBM
Weirauch et al.(2014)
pTH7890 		0.838 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh4_pg.C_scaffold_83000006 GATA 264 299

Links

Other GATA family TFs
Other Volvox carteri TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NFIA_042030 Neosartorya fischeri CADNFIAG00003031 N
OIDMADRAFT_134019 Oidiodendron maius OIDMADRAFT_134019 N
TSTA_051640 Talaromyces stipitatus TSTA_051640 N