CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf023969m
(
Mimulus guttatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
mgf023969m
T196342_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATA12
M00863_2.00
Arabidopsis thaliana
NNNGATBN
NVATCNNN
PBM
Franco-Zorrilla et al.(2014)
GATA12
0.867
0.972
GATA12
M06895_2.00
Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH
Dap-seq
OMalley et al.(2016)
GATA12_col_a
0.867
0.972
GATA12
M06896_2.00
Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR
Dap-seq
OMalley et al.(2016)
GATA12_colamp_a
0.867
0.972
GATA9
M02002_2.00
Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN
PBM
Weirauch et al.(2014)
pTH7378
0.862
0.944
GATA4
M00727_2.00
Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN
PBM
Chang et al.(2013)
pTH7196
0.847
0.889
GATA4
M06891_2.00
Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND
Dap-seq
OMalley et al.(2016)
GATA4_col_a
0.847
0.889
GATA8
M02000_2.00
Arabidopsis thaliana
NNGATYYVN
NBRRATCNN
PBM
Weirauch et al.(2014)
pTH7665
0.843
0.833
Q76DY3_TOBAC
M10600_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGP1_01
0.843
0.833
GATA3
M02003_2.00
Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN
PBM
Weirauch et al.(2014)
pTH7657
0.838
0.806
GATA1
M01998_2.00
Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN
PBM
Weirauch et al.(2014)
pTH8144
0.832
0.833
GATA1
M06887_2.00
Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY
Dap-seq
OMalley et al.(2016)
GATA1_col_a
0.832
0.833
GATA1
M06888_2.00
Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND
Dap-seq
OMalley et al.(2016)
GATA1_colamp_a
0.832
0.833
GATA6
M01999_2.00
Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN
PBM
Weirauch et al.(2014)
pTH7317
0.832
0.778
GATA6
M06890_2.00
Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR
Dap-seq
OMalley et al.(2016)
GATA6_col200_a
0.832
0.778
GATA10
M01994_2.00
Arabidopsis thaliana
CAGATCTA
TAGATCTG
PBM
Weirauch et al.(2014)
pTH7615
0.823
0.806
GATA11
M01995_2.00
Arabidopsis thaliana
CAGATCTH
DAGATCTG
PBM
Weirauch et al.(2014)
pTH7486
0.823
0.806
GATA11
M06882_2.00
Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD
Dap-seq
OMalley et al.(2016)
GATA11_col_a
0.823
0.806
GATA7
M02004_2.00
Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN
PBM
Weirauch et al.(2014)
pTH7658
0.819
0.750
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf023969m
GATA
255
290
CVHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLV
Links
Other
GATA
family TFs
Other
Mimulus guttatus
TFs
614 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI001448
Acyrthosiphon pisum
ACYPI001448
I
AAEL002902
Aedes aegypti
AAEL002902
I
ENSAMEG00000008556
Ailuropoda melanoleuca
ENSAMEG00000008556
I
ENSAMEG00000020165
Ailuropoda melanoleuca
ENSAMEG00000020165
I
Alligator_sinensis_CCG002585.1
Alligator sinensis
Alligator_sinensis_CCG002585.1
I
Alligator_sinensis_CCG005115.1
Alligator sinensis
Alligator_sinensis_CCG005115.1
I
Alligator_sinensis_CCG008488.1
Alligator sinensis
Alligator_sinensis_CCG008488.1
I
ENSAPLG00000000878
Anas platyrhynchos
ENSAPLG00000000878
I
ENSAPLG00000007177
Anas platyrhynchos
ENSAPLG00000007177
I
ENSACAG00000009715
Anolis carolinensis
ENSACAG00000009715
I
twist1
Anolis carolinensis
ENSACAG00000011825
I
ENSACAG00000015086
Anolis carolinensis
ENSACAG00000015086
I
AATE005140
Anopheles atroparvus
AATE005140
I
ACOM023427
Anopheles coluzzii
ACOM023427
I
AFAF020800
Anopheles farauti
AFAF020800
I
AGAP011985
Anopheles gambiae
AGAP011985
I
AMEC000330
Anopheles melas
AMEC000330
I
ASTEI05879
Anopheles stephensi
ASTEI05879
I
GB40416
Apis mellifera
GB40416
I
Afo_R010658
Aptenodytes forsteri
Afo_R010658
I
Afo_R013292
Aptenodytes forsteri
Afo_R013292
I
ENSAMXG00000024993
Astyanax mexicanus
ENSAMXG00000024993
I
ENSAMXG00000025039
Astyanax mexicanus
ENSAMXG00000025039
I
ENSAMXG00000025095
Astyanax mexicanus
ENSAMXG00000025095
I
ENSAMXG00000025610
Astyanax mexicanus
ENSAMXG00000025610
I
ENSAMXG00000025657
Astyanax mexicanus
ENSAMXG00000025657
I
ACEP23430
Atta cephalotes
ACEP23430
I
BGLB003400
Biomphalaria glabrata
BGLB003400
I
BGIBMGA008990
Bombyx mori
BGIBMGA008990
I
ENSP00000405176-D1
Bos grunniens
ENSP00000405176-D1
I
TWIST2
Bos taurus
ENSBTAG00000021444
I
TWIST1
Bos taurus
ENSBTAG00000046922
I
estExt_gwp.C_4170045
Branchiostoma floridae
estExt_gwp.C_4170045
I
fgenesh2_pm.scaffold_217000008
Branchiostoma floridae
fgenesh2_pm.scaffold_217000008
I
Brh_R012765
Buceros rhinoceros
Brh_R012765
I
TWIST2
Callithrix jacchus
ENSCJAG00000023006
I
Aan_R001044
Calypte anna
Aan_R001044
I
Aan_R002857
Calypte anna
Aan_R002857
I
Cflo_04586--NP_001011637.1_APIME
Camponotus floridanus
Cflo_04586--NP_001011637.1_APIME
I
TWIST2
Canis familiaris
ENSCAFG00000012469
I
CapteG111042
Capitella teleta
CapteG111042
I
CapteG154829
Capitella teleta
CapteG154829
I
TWIST2
Cavia porcellus
ENSCPOG00000025980
I
Cmyd_10002489
Chelonia mydas
Cmyd_10002489
I
Cmyd_10006750
Chelonia mydas
Cmyd_10006750
I
ENSCSAG00000018801
Chlorocebus sabaeus
ENSCSAG00000018801
I
ENSCSAG00000019610
Chlorocebus sabaeus
ENSCSAG00000019610
I
CLEC011700
Cimex lectularius
CLEC011700
I
csin110283
Clonorchis sinensis
csin110283
I
CGI_10006631
Crassostrea gigas
CGI_10006631
I
CGI_10013641
Crassostrea gigas
CGI_10013641
I
KGM_08281
Danaus plexippus
KGM_08281
N
twist3
Danio rerio
ENSDARG00000019646
I
twist1a
Danio rerio
ENSDARG00000030402
I
twist1b
Danio rerio
ENSDARG00000076010
I
twist2
Danio rerio
ENSDARG00000078266
I
DAPPUDRAFT_320202
Daphnia pulex
DAPPUDRAFT_320202
I
TWIST2
Dasypus novemcinctus
ENSDNOG00000002434
I
TWIST1
Dasypus novemcinctus
ENSDNOG00000037354
I
YQE_04855
Dendroctonus ponderosae
YQE_04855
I
DILT_0001206901
Diphyllobothrium latum
DILT_0001206901
I
ENSDORG00000012866
Dipodomys ordii
ENSDORG00000012866
I
GF13559
Drosophila ananassae
FBgn0090588
I
twi
Drosophila erecta
FBgn0064598
I
GH20971
Drosophila grimshawi
FBgn0128433
I
twi
Drosophila melanogaster
FBgn0003900
D
GI21307
Drosophila mojavensis
FBgn0144037
I
GL11229
Drosophila persimilis
FBgn0148838
I
twi
Drosophila pseudoobscura
FBgn0243556
I
GM15978
Drosophila sechellia
FBgn0170894
I
twi
Drosophila simulans
FBgn0016355
I
twi
Drosophila virilis
FBgn0020065
I
GK19547
Drosophila willistoni
FBgn0221545
I
twi
Drosophila yakuba
FBgn0084444
I
ECANG7_02703
Echinococcus canadensis
ECANG7_02703
I
EmuJ_000663800
Echinococcus multilocularis
EmuJ_000663800
I
TWIST2
Echinops telfairi
ENSETEG00000009809
I
ENSETEG00000013115
Echinops telfairi
ENSETEG00000013115
I
ECPE_0000551801
Echinostoma caproni
ECPE_0000551801
I
TWIST1
Erinaceus europaeus
ENSEEUG00000015333
I
ENSFALG00000009781
Ficedula albicollis
ENSFALG00000009781
I
ENSFALG00000014990
Ficedula albicollis
ENSFALG00000014990
I
ENSGMOG00000002790
Gadus morhua
ENSGMOG00000002790
I
ENSGMOG00000003155
Gadus morhua
ENSGMOG00000003155
I
ENSGALG00000004274
Gallus gallus
ENSGALG00000004274
I
ENSGALG00000006321
Gallus gallus
ENSGALG00000006321
I
ENSGALG00000026059
Gallus gallus
ENSGALG00000026059
I
twist2
Gasterosteus aculeatus
ENSGACG00000002227
I
twist3b
Gasterosteus aculeatus
ENSGACG00000004773
I
TWIST1
Gasterosteus aculeatus
ENSGACG00000006420
I
twist3
Gasterosteus aculeatus
ENSGACG00000007963
I
twist1b
Gasterosteus aculeatus
ENSGACG00000008070
I
Gfo_R012065
Geospiza fortis
Gfo_R012065
I
Hsal_01530--NP_001011637.1_APIME
Harpegnathos saltator
Hsal_01530--NP_001011637.1_APIME
I
HMEL011603
Heliconius melpomene
HMEL011603
I
HelroG155122
Helobdella robusta
HelroG155122
I
TWIST1
Homo sapiens
ENSG00000122691
D
TWIST2
Homo sapiens
ENSG00000233608
I
HDID_0001003601
Hymenolepis diminuta
HDID_0001003601
I
HmN_000912800
Hymenolepis microstoma
HmN_000912800
I
HNAJ_0000179601
Hymenolepis nana
HNAJ_0000179601
I
ENSSTOG00000004633
Ictidomys tridecemlineatus
ENSSTOG00000004633
I
ISCW009433
Ixodes scapularis
ISCW009433
I
ENSLACG00000012096
Latimeria chalumnae
ENSLACG00000012096
I
ENSLACG00000013366
Latimeria chalumnae
ENSLACG00000013366
I
ENSLACG00000019113
Latimeria chalumnae
ENSLACG00000019113
I
ENSLOCG00000017835
Lepisosteus oculatus
ENSLOCG00000017835
I
ENSLOCG00000018198
Lepisosteus oculatus
ENSLOCG00000018198
I
ENSLOCG00000018350
Lepisosteus oculatus
ENSLOCG00000018350
I
LDEC006528
Leptinotarsa decemlineata
LDEC006528
I
TWIST2
Loxodonta africana
ENSLAFG00000032174
I
LCUP006189
Lucilia cuprina
LCUP006189
I
TWIST1
Macaca mulatta
ENSMMUG00000011173
I
TWIST2
Macaca mulatta
ENSMMUG00000021909
I
ENSMEUG00000013853
Macropus eugenii
ENSMEUG00000013853
I
ENSMGAG00000002218
Meleagris gallopavo
ENSMGAG00000002218
I
TWIST1
Meleagris gallopavo
ENSMGAG00000009311
I
MCOS_0000111401
Mesocestoides corti
MCOS_0000111401
I
ENSMODG00000001412
Monodelphis domestica
ENSMODG00000001412
I
TWIST1
Monodelphis domestica
ENSMODG00000023924
I
MDOA005417
Musca domestica
MDOA005417
I
ENSMPUG00000019429
Mustela putorius furo
ENSMPUG00000019429
I
Twist2
Mus musculus
ENSMUSG00000007805
D
Twist1
Mus musculus
ENSMUSG00000035799
D
Myotis_brandtii_Twist1_10031742
Myotis brandtii
Myotis_brandtii_Twist1_10031742
I
TWIST1
Myotis lucifugus
ENSMLUG00000007047
I
TWIST2
Myotis lucifugus
ENSMLUG00000023316
I
NV10141
Nasonia vitripennis
NV10141
I
ENSNLEG00000011342
Nomascus leucogenys
ENSNLEG00000011342
I
ENSNLEG00000019264
Nomascus leucogenys
ENSNLEG00000019264
I
TWIST2
Ochotona princeps
ENSOPRG00000017069
I
Ocbimv22015922m.g
Octopus bimaculoides
Ocbimv22015922m.g
I
Ogr01719
Ophisaurus gracilis
Ogr01719
I
Ogr06591
Ophisaurus gracilis
Ogr06591
I
Ogr11552
Ophisaurus gracilis
Ogr11552
I
Ogr11553
Ophisaurus gracilis
Ogr11553
I
ENSONIG00000020502
Oreochromis niloticus
ENSONIG00000020502
I
ENSONIG00000020610
Oreochromis niloticus
ENSONIG00000020610
I
ENSONIG00000021177
Oreochromis niloticus
ENSONIG00000021177
I
ENSONIG00000021342
Oreochromis niloticus
ENSONIG00000021342
I
ENSONIG00000021420
Oreochromis niloticus
ENSONIG00000021420
I
TWIST1
Ornithorhynchus anatinus
ENSOANG00000009614
I
ENSOANG00000012950
Ornithorhynchus anatinus
ENSOANG00000012950
I
TWIST2
Oryctolagus cuniculus
ENSOCUG00000004073
I
TWIST1
Oryzias latipes
ENSORLG00000004012
I
twist1
Oryzias latipes
ENSORLG00000007251
I
twist3
Oryzias latipes
ENSORLG00000016373
I
twist2
Oryzias latipes
ENSORLG00000018096
I
TWIST2
Otolemur garnettii
ENSOGAG00000029007
I
ENSOARG00000000265
Ovis aries
ENSOARG00000000265
I
ENSOARG00000009754
Ovis aries
ENSOARG00000009754
I
ENSPTRG00000018960
Pan troglodytes
ENSPTRG00000018960
I
TWIST2
Pan troglodytes
ENSPTRG00000033910
I
ENSPANG00000001578
Papio anubis
ENSPANG00000001578
I
PHUM396880
Pediculus humanus
PHUM396880
I
ENSPSIG00000001961
Pelodiscus sinensis
ENSPSIG00000001961
I
ENSPSIG00000012843
Pelodiscus sinensis
ENSPSIG00000012843
I
ENSPMAG00000003993
Petromyzon marinus
ENSPMAG00000003993
I
ENSPMAG00000010126
Petromyzon marinus
ENSPMAG00000010126
I
ENSPFOG00000019887
Poecilia formosa
ENSPFOG00000019887
I
ENSPFOG00000020053
Poecilia formosa
ENSPFOG00000020053
I
ENSPFOG00000020314
Poecilia formosa
ENSPFOG00000020314
I
ENSPFOG00000020501
Poecilia formosa
ENSPFOG00000020501
I
Pvit_02271
Pogona vitticeps
Pvit_02271
I
Pvit_05844
Pogona vitticeps
Pvit_05844
I
ENSPPYG00000017754
Pongo abelii
ENSPPYG00000017754
I
TWIST1
Pteropus vampyrus
ENSPVAG00000001710
I
Twist1
Rattus norvegicus
ENSRNOG00000011101
I
Twist2
Rattus norvegicus
ENSRNOG00000020355
I
RPRC000323
Rhodnius prolixus
RPRC000323
I
nRc.2.0.1.g46228
Romanomermis culicivorax
nRc.2.0.1.g46228
I
Sakowv30001350m.g
Saccoglossus kowalevskii
Sakowv30001350m.g
I
ENSSHAG00000003328
Sarcophilus harrisii
ENSSHAG00000003328
I
SSLN_0000059301
Schistocephalus solidus
SSLN_0000059301
I
A_07561
Schistosoma haematobium
A_07561
I
Sjc_0042560
Schistosoma japonicum
Sjc_0042560
I
Smp_203270
Schistosoma mansoni
Smp_203270
I
SINV20920
Solenopsis invicta
SINV20920
I
TWIST1
Sus scrofa
ENSSSCG00000015370
I
TWIST2
Sus scrofa
ENSSSCG00000016343
I
TASK_0000180901
Taenia asiatica
TASK_0000180901
I
TsM_000716700
Taenia solium
TsM_000716700
I
TWIST1
Taeniopygia guttata
ENSTGUG00000002643
I
ENSTGUG00000003194
Taeniopygia guttata
ENSTGUG00000003194
I
twist2
Takifugu rubripes
ENSTRUG00000006090
I
twist3
Takifugu rubripes
ENSTRUG00000011374
I
twist3
Takifugu rubripes
ENSTRUG00000012607
I
twist1
Takifugu rubripes
ENSTRUG00000015797
I
twist3
Tetraodon nigroviridis
ENSTNIG00000000441
I
twist2
Tetraodon nigroviridis
ENSTNIG00000001562
I
TWIST1
Tetraodon nigroviridis
ENSTNIG00000001678
I
twist1b
Tetraodon nigroviridis
ENSTNIG00000018440
I
TC014598
Tribolium castaneum
TC014598
I
D917_00468
Trichinella nativa
D917_00468
I
EFV58362
Trichinella spiralis
EFV58362
I
TMUE_s0004013100
Trichuris muris
TMUE_s0004013100
I
D918_07072
Trichuris suis
D918_07072
I
TTRE_0000397101
Trichuris trichiura
TTRE_0000397101
I
twist1.L
Xenopus laevis
XB-GENE-6255840
I
twist1.S
Xenopus laevis
XB-GENE-865309
I
twist1
Xenopus tropicalis
XB-GENE-479802
I
twist2
Xenopus tropicalis
XB-GENE-5878700
I
ENSXMAG00000019787
Xiphophorus maculatus
ENSXMAG00000019787
I
ENSXMAG00000019956
Xiphophorus maculatus
ENSXMAG00000019956
I
ENSXMAG00000019999
Xiphophorus maculatus
ENSXMAG00000019999
I
ENSXMAG00000020062
Xiphophorus maculatus
ENSXMAG00000020062
I
ENSXMAG00000020142
Xiphophorus maculatus
ENSXMAG00000020142
I
L798_05856
Zootermopsis nevadensis
L798_05856
I