orange1.1g030971m.g (Citrus sinensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 orange1.1g030971m.g T196715_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.836 0.806
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.816 0.806
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.816 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g030971m GATA 11 46

Links

Other GATA family TFs
Other Citrus sinensis TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008647 Acyrthosiphon pisum ACYPI008647 I
ACYPI48827 Acyrthosiphon pisum ACYPI48827 I
Aqu1.224085 Amphimedon queenslandica Aqu1.224085 I
ACOC_0000844001 Angiostrongylus costaricensis ACOC_0000844001 I
AALB004535 Anopheles albimanus AALB004535 I
ACUA028400 Anopheles culicifacies ACUA028400 I
AGAP007376 Anopheles gambiae AGAP007376 I
AMAM001825 Anopheles maculatus AMAM001825 I
GB50732 Apis mellifera GB50732 I
ACEP21720 Atta cephalotes ACEP21720 I
estExt_fgenesh2_pg.C_2670023 Branchiostoma floridae estExt_fgenesh2_pg.C_2670023 I
fgenesh2_pg.scaffold_208000070 Branchiostoma floridae fgenesh2_pg.scaffold_208000070 I
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I
CapteG223273 Capitella teleta CapteG223273 I
csin107256 Clonorchis sinensis csin107256 I
CGI_10002627 Crassostrea gigas CGI_10002627 I
CGI_10012001 Crassostrea gigas CGI_10012001 I
DAPPUDRAFT_300656 Daphnia pulex DAPPUDRAFT_300656 I
YQE_10237 Dendroctonus ponderosae YQE_10237 I
EVEC_0000136801 Enterobius vermicularis EVEC_0000136801 N
GPUH_0002134401 Gongylonema pulchrum GPUH_0002134401 I
HHAL009455-PA Halyomorpha halys HHAL009455-PA I
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I
HelroG146050 Helobdella robusta HelroG146050 I
ISCW017122 Ixodes scapularis ISCW017122 I
LDEC000161 Leptinotarsa decemlineata LDEC000161 I
LotgiG96004 Lottia gigantea LotgiG96004 I
MDP0000183865 Malus domestica MDP0000183865 I
ML027313a Mnemiopsis leidyi ML027313a I
NV16776 Nasonia vitripennis NV16776 I
T265_04195 Opisthorchis viverrini T265_04195 I
PHUM011400 Pediculus humanus PHUM011400 I
ENSPMAG00000000964 Petromyzon marinus ENSPMAG00000000964 I
PPAI000251 Phlebotomus papatasi PPAI000251 I
POPTR_0016s05440 Populus trichocarpa POPTR_0016s05440 I
PXEA_0001432401 Protopolystoma xenopodis PXEA_0001432401 I
RPRC000951 Rhodnius prolixus RPRC000951 I
SCUD_0001212601 Schistosoma curassoni SCUD_0001212601 I
A_04341 Schistosoma haematobium A_04341 I
Sjc_0096630 Schistosoma japonicum Sjc_0096630 I
Smp_030250 Schistosoma mansoni Smp_030250 I
SMRZ_0000504601 Schistosoma margrebowiei SMRZ_0000504601 I
SMTD_0000774701 Schistosoma mattheei SMTD_0000774701 I
SROB_0000925201 Schistosoma rodhaini SROB_0000925201 I
SMU15024997 Schmidtea mediterranea SMU15024997 I
SMU15029949 Schmidtea mediterranea SMU15029949 I
SBAD_0000676601 Soboliphyme baturini SBAD_0000676601 I
SINV17788 Solenopsis invicta SINV17788 I
L892_g3951 Steinernema scapterisci L892_g3951 I
SPU_025737 Strongylocentrotus purpuratus SPU_025737 I
SPU_025589 Strongylocentrotus purpuratus SPU_025589 I
TC007453 Tribolium castaneum TC007453 I
EFV53177 Trichinella spiralis EFV53177 N
TRE_0001025401 Trichobilharzia regenti TRE_0001025401 I
TMUE_s0062005000 Trichuris muris TMUE_s0062005000 I
D918_06860 Trichuris suis D918_06860 I
TTRE_0000464501 Trichuris trichiura TTRE_0000464501 I