6181_YER040W (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 6181_YER040W T197021_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLN3
M00048_2.00 		Saccharomyces cerevisiae
NHGATAAS
STTATCDN		 PBM
Badis et al.(2008)
GLN3_2032 		0.867 1.000
GLN3
M01545_2.00 		Saccharomyces cerevisiae
HGATARN
NYTATCD		 PBM
Zhu et al.(2009)
Gln3 		0.867 1.000
GLN3
M07477_2.00 		Saccharomyces cerevisiae
GATWR
YWATC		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0307.1 		0.867 1.000
GLN3
M08559_2.00 		Saccharomyces cerevisiae
GATWR
YWATC		 Misc
DeBoer et al.(2011)
YER040W_539 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6181_YER040W GATA 307 341

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g10048 Acanthocheilonema viteae nAv.1.0.1.g10048 N
Bm4266 Brugia malayi Bm4266 N
BTMF_0001363801 Brugia timori BTMF_0001363801 N
nDi.2.2.2.g01827 Dirofilaria immitis nDi.2.2.2.g01827 N
LOAG_06099 Loa loa LOAG_06099 N
OFLC_0000117701 Onchocerca flexuosa OFLC_0000117701 N
nOo.2.0.1.g04194 Onchocerca ochengi nOo.2.0.1.g04194 N
WBGene00239125 Onchocerca volvulus WBGene00239125 N