CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g10048
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g10048
T155059_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t10048-RA
C2H2 ZF
216
238
YSCPECDQTFINTARLERHLAVH
nAv.1.0.1.t10048-RA
C2H2 ZF
244
268
FQCPLCQKVYKYEYNLFYHWRRTCH
nAv.1.0.1.t10048-RA
C2H2 ZF
527
550
VQCSVCSRTFVNMTRLERHIAGFH
nAv.1.0.1.t10048-RA
C2H2 ZF
556
577
HPCVLCGNRFKYDYNLLSHYRR
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nLs.2.1.2.g00764
Litomosoides sigmodontis
nLs.2.1.2.g00764
N
0.769
nOo.2.0.1.g04194
Onchocerca ochengi
nOo.2.0.1.g04194
N
0.769
OFLC_0000117701
Onchocerca flexuosa
OFLC_0000117701
N
0.769
nDi.2.2.2.g01827
Dirofilaria immitis
nDi.2.2.2.g01827
N
0.769
BTMF_0001363801
Brugia timori
BTMF_0001363801
N
0.769
LOAG_06099
Loa loa
LOAG_06099
N
0.769
WBGene00239125
Onchocerca volvulus
WBGene00239125
N
0.769
Bm4266
Brugia malayi
Bm4266
N
0.769