CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc16857
(
Meloidogyne incognita
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Minc16857
T197179_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc16857
GATA
222
256
CLNCGTTKTKQWCIYTKENYLCYKCGDYNRKLGKH
Links
Other
GATA
family TFs
Other
Meloidogyne incognita
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g09820
Acanthocheilonema viteae
nAv.1.0.1.g09820
N
ALUE_0002347001
Ascaris lumbricoides
ALUE_0002347001
N
Bm4928
Brugia malayi
Bm4928
N
BTMF_0000894301
Brugia timori
BTMF_0000894301
N
nDi.2.2.2.g10816
Dirofilaria immitis
nDi.2.2.2.g10816
N
nDi.2.2.2.g10815
Dirofilaria immitis
nDi.2.2.2.g10815
N
EEL_0000228001
Elaeophora elaphi
EEL_0000228001
N
GPUH_0001763901
Gongylonema pulchrum
GPUH_0001763901
N
HPBE_0001998601
Heligmosomoides bakeri
HPBE_0001998601
N
Hba_09857
Heterorhabditis bacteriophora
Hba_09857
N
MhA1_Contig1477.frz3.gene12
Meloidogyne hapla
MhA1_Contig1477.frz3.gene12
N
Minc13427
Meloidogyne incognita
Minc13427
N
Minc01562
Meloidogyne incognita
Minc01562
N
OFLC_0000969401
Onchocerca flexuosa
OFLC_0000969401
N
nOo.2.0.1.g08795
Onchocerca ochengi
nOo.2.0.1.g08795
N
WBGene00248153
Onchocerca volvulus
WBGene00248153
N
nRc.2.0.1.g07787
Romanomermis culicivorax
nRc.2.0.1.g07787
N
L898_g28210
Steinernema monticolum
L898_g28210
N
SPAL_0001609400
Strongyloides papillosus
SPAL_0001609400
N
SSTP_0001091000
Strongyloides stercoralis
SSTP_0001091000
N
SVE_1982000
Strongyloides venezuelensis
SVE_1982000
N
WUBG_10878
Wuchereria bancrofti
WUBG_10878
N