CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc16857
(
Meloidogyne incognita
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Minc16857
T197179_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc16857
GATA
222
256
CLNCGTTKTKQWCIYTKENYLCYKCGDYNRKLGKH
Links
Other
GATA
family TFs
Other
Meloidogyne incognita
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc17602
Meloidogyne incognita
Minc17602
N
0.867
maker-nMf.1.1.scaf06571-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06571-snap-gene-0.8
N
0.867
snap_masked-nMf.1.1.scaf17427-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf17427-processed-gene-0.1
N
0.867
maker-nMf.1.1.scaf12440-snap-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf12440-snap-gene-0.3
N
0.828