ACOC_0000090001 (Angiostrongylus costaricensis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 ACOC_0000090001 T197371_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG07341
M01230_2.00 		Caenorhabditis briggsae
HGATANNN
NNNTATCD		 PBM
Lambert et al.(2019)
pTH11455 		0.825 0.743
elt-3
M08128_2.00 		Caenorhabditis elegans
TGATAAVA
TBTTATCA		 ChIP-seq
Mathelier et al.(2014)
MA0542.1 		0.825 0.743
elt-3
M09557_2.00 		Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH		 Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode 		0.825 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000090001-mRNA-1 GATA 48 82

Links

Other GATA family TFs
Other Angiostrongylus costaricensis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR04G06900 Leersia perrieri LPERR04G06900 N
OBART04G10380 Oryza barthii OBART04G10380 N
ORGLA02G0343600 Oryza glaberrima ORGLA02G0343600 N
ORGLA04G0074500 Oryza glaberrima ORGLA04G0074500 N
OGLUM04G10060 Oryza glumaepatula OGLUM04G10060 N
BGIOSGA015201 Oryza indica BGIOSGA015201 N
ONIVA04G08240 Oryza nivara ONIVA04G08240 N
ORUFI04G11550 Oryza rufipogon ORUFI04G11550 N
OS04G0386900 Oryza sativa OS04G0386900 N
Pavir.Gb01948 Panicum virgatum Pavir.Gb01948 N
Si012575m.g Setaria italica Si012575m.g N