CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_03216
(
Teladorsagia circumcincta
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
TELCIR_03216
T197874_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG07341
M01230_2.00
Caenorhabditis briggsae
HGATANNN
NNNTATCD
PBM
Lambert et al.(2019)
pTH11455
0.825
0.714
elt-3
M08128_2.00
Caenorhabditis elegans
TGATAAVA
TBTTATCA
ChIP-seq
Mathelier et al.(2014)
MA0542.1
0.825
0.714
elt-3
M09557_2.00
Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH
Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode
0.825
0.714
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_03216
GATA
246
280
CTTCQTRTTSLWRRNHLGEIECNACNLYFRKNNCK
Links
Other
GATA
family TFs
Other
Teladorsagia circumcincta
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB02G30290
Oryza brachyantha
OB02G30290
N
OPUNC02G20840
Oryza punctata
OPUNC02G20840
N