ENSPSIG00000010930 (Pelodiscus sinensis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSPSIG00000010930 T199198_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.840 0.840
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.840 0.840
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.840 0.840
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.840 0.840
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.840 0.840
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.717 0.717
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.717 0.717
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.717 0.717
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000012224 Grainyhead 231 449

Links

Other Grainyhead family TFs
Other Pelodiscus sinensis TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.23.237.1 Phytophthora capsici gw1.23.237.1 N
PITG_12840 Phytophthora infestans PITG_12840 N
fgenesh_scip_prom.28083.3870 Phytophthora lateralis fgenesh_scip_prom.28083.3870 N
F443_02366 Phytophthora parasitica F443_02366 N
F443_02365 Phytophthora parasitica F443_02365 N
Phyra75006 Phytophthora ramorum Phyra75006 N
Physo143270 Phytophthora sojae Physo143270 N
maker-pag1_scaffold_571-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_571-snap-gene-0.7 N
maker-pag1_scaffold_26-snap-gene-0.60 Pythium aphanidermatum maker-pag1_scaffold_26-snap-gene-0.60 N
maker-par_contig_926-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_926-fgenesh-gene-0.0 N
maker-par_contig_6510-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_6510-snap-gene-0.1 N
maker-par_contig_4456-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_4456-fgenesh-gene-0.0 N
maker-pir_contig_1013-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1013-fgenesh-gene-0.0 N
maker-pir_contig_87-fgenesh-gene-0.17 Pythium irregulare maker-pir_contig_87-fgenesh-gene-0.17 N
fgenesh-pir_contig_1013-abinit-gene-0.11 Pythium irregulare fgenesh-pir_contig_1013-abinit-gene-0.11 N
maker-piw_contig_165-snap-gene-0.13 Pythium iwayamai maker-piw_contig_165-snap-gene-0.13 N
maker-piw_contig_1851-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1851-snap-gene-0.3 N
maker-piw_contig_496-snap-gene-0.3 Pythium iwayamai maker-piw_contig_496-snap-gene-0.3 N
PYU1_G007782 Pythium ultimum PYU1_G007782 N
PYU1_G008786 Pythium ultimum PYU1_G008786 N
maker-pve_contig_476-snap-gene-0.24 Pythium vexans maker-pve_contig_476-snap-gene-0.24 N