tfcp2.L (Xenopus laevis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 XB-GENE-865546 T199610_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.881 0.881
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.829 0.829
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.829 0.829
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.829 0.829
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.829 0.829
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.804 0.804
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.804 0.804
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.804 0.804
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.804 0.804
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.804 0.804
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.804 0.804
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.804 0.804
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.804 0.804
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.804 0.804
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.804 0.804
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.795 0.795
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.795 0.795
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.795 0.795
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.762 0.762
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.762 0.762
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH97529 Grainyhead 42 260

Links

Other Grainyhead family TFs
Other Xenopus laevis TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007562 Ailuropoda melanoleuca ENSAMEG00000007562 N
ENSAPLG00000012018 Anas platyrhynchos ENSAPLG00000012018 N
Afo_R013968 Aptenodytes forsteri Afo_R013968 N
ENSP00000291374-D1 Bos grunniens ENSP00000291374-D1 N
Brh_R010385 Buceros rhinoceros Brh_R010385 N
ENSCAFG00000023754 Canis familiaris ENSCAFG00000023754 N
ENSCPOG00000003956 Cavia porcellus ENSCPOG00000003956 N
Cmyd_10005415 Chelonia mydas Cmyd_10005415 N
ENSCSAG00000001057 Chlorocebus sabaeus ENSCSAG00000001057 N
ENSCHOG00000004264 Choloepus hoffmanni ENSCHOG00000004264 N
ENSDNOG00000002252 Dasypus novemcinctus ENSDNOG00000002252 N
ENSETEG00000001618 Echinops telfairi ENSETEG00000001618 N
ENSECAG00000008368 Equus caballus ENSECAG00000008368 N
ENSEEUG00000015979 Erinaceus europaeus ENSEEUG00000015979 N
ENSFCAG00000000744 Felis catus ENSFCAG00000000744 N
ENSFALG00000000604 Ficedula albicollis ENSFALG00000000604 N
Gfo_R011647 Geospiza fortis Gfo_R011647 N
ENSGGOG00000026784 Gorilla gorilla ENSGGOG00000026784 N
ZBTB8B Homo sapiens ENSG00000273274 N
ENSSTOG00000027615 Ictidomys tridecemlineatus ENSSTOG00000027615 N
ENSLACG00000016238 Latimeria chalumnae ENSLACG00000016238 N
ENSLOCG00000000323 Lepisosteus oculatus ENSLOCG00000000323 N
ENSLAFG00000023212 Loxodonta africana ENSLAFG00000023212 N
ENSP00000291374 Macaca fascicularis ENSP00000291374 N
ENSMMUG00000019801 Macaca mulatta ENSMMUG00000019801 N
ENSMGAG00000004943 Meleagris gallopavo ENSMGAG00000004943 N
ENSMODG00000017428 Monodelphis domestica ENSMODG00000017428 N
ENSMPUG00000015225 Mustela putorius furo ENSMPUG00000015225 N
Zbtb8b Mus musculus ENSMUSG00000048485 N
Myotis_brandtii_ZBTB8B_10012392 Myotis brandtii Myotis_brandtii_ZBTB8B_10012392 N
ENSMLUG00000000818 Myotis lucifugus ENSMLUG00000000818 N
ENSOPRG00000000880 Ochotona princeps ENSOPRG00000000880 N
Ogr05993 Ophisaurus gracilis Ogr05993 N
ENSOANG00000001192 Ornithorhynchus anatinus ENSOANG00000001192 N
ENSOCUG00000011975 Oryctolagus cuniculus ENSOCUG00000011975 N
ENSOGAG00000013012 Otolemur garnettii ENSOGAG00000013012 N
ENSOARG00000020934 Ovis aries ENSOARG00000020934 N
ENSPTRG00000000485 Pan troglodytes ENSPTRG00000000485 N
ENSPANG00000016510 Papio anubis ENSPANG00000016510 N
Pvit_17719 Pogona vitticeps Pvit_17719 N
ENSPPYG00000001591 Pongo abelii ENSPPYG00000001591 N
ENSPCAG00000013117 Procavia capensis ENSPCAG00000013117 N
Zbtb8b Rattus norvegicus ENSRNOG00000026898 N
ENSSARG00000013492 Sorex araneus ENSSARG00000013492 N
ENSSSCG00000022120 Sus scrofa ENSSSCG00000022120 N
ENSTGUG00000001374 Taeniopygia guttata ENSTGUG00000001374 N
ENSTSYG00000007928 Tarsius syrichta ENSTSYG00000007928 N
zbtb8b Xenopus tropicalis XB-GENE-5788421 N