CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL32
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT3G49950
T199832_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G49950.1
GRAS
27
408
MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFMSEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWV
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g04880
Acanthocheilonema viteae
nAv.1.0.1.g04880
N
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
ASIM_0001210001
Anisakis simplex
ASIM_0001210001
N
ASIM_0001432701
Anisakis simplex
ASIM_0001432701
N
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
ASU_03242
Ascaris suum
ASU_03242
N
ASU_13374
Ascaris suum
ASU_13374
N
Bm3947
Brugia malayi
Bm3947
N
BTMF_0000795401
Brugia timori
BTMF_0000795401
N
CBG12345
Caenorhabditis briggsae
CBG12345
N
tlf-1
Caenorhabditis elegans
WBGene00006577
N
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
nDi.2.2.2.g05314
Dirofilaria immitis
nDi.2.2.2.g05314
N
DME_0000578001
Dracunculus medinensis
DME_0000578001
N
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
EVEC_0000523501
Enterobius vermicularis
EVEC_0000523501
N
HCOI00597600
Haemonchus contortus
HCOI00597600
N
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
Hba_19518
Heterorhabditis bacteriophora
Hba_19518
N
LOAG_02128
Loa loa
LOAG_02128
N
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
OFLC_0000425901
Onchocerca flexuosa
OFLC_0000425901
N
nOo.2.0.1.g03279
Onchocerca ochengi
nOo.2.0.1.g03279
N
WBGene00238395
Onchocerca volvulus
WBGene00238395
N
scaffold259-EXSNAP2012.8
Pristionchus exspectatus
scaffold259-EXSNAP2012.8
N
Ppa-tlf-1
Pristionchus pacificus
PPA12059
N
L596_g17870
Steinernema carpocapsae
L596_g17870
N
SMUV_0000869101
Syphacia muris
SMUV_0000869101
N
TCLT_0000474901
Thelazia callipaeda
TCLT_0000474901
N
TCNE_0000853601
Toxocara canis
TCNE_0000853601
N
WUBG_01280
Wuchereria bancrofti
WUBG_01280
N