CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL23
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT5G41920
T199842_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G41920.1
GRAS
40
400
LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRRKRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB01725.1
Alternaria brassicicola
AB01725.1
N
AOL_s00054g24
Arthrobotrys oligospora
AOL_s00054g24
N
MCYG_02584
Arthroderma otae
MCYG_02584
N
CADAFLAG00005698
Aspergillus flavus
CADAFLAG00005698
N
AFUA_2G10850
Aspergillus fumigatus
CADAFUAG00004240
N
ANIA_05924
Aspergillus nidulans
CADANIAG00007107
N
ATEG_01494
Aspergillus terreus
CADATEAG00001577
N
M437DRAFT_45546
Aureobasidium melanogenum
M437DRAFT_45546
I
M438DRAFT_281522
Aureobasidium pullulans
M438DRAFT_281522
I
BBA_01486
Beauveria bassiana
BBA_01486
N
COCC4DRAFT_151267
Bipolaris maydis
COCC4DRAFT_151267
N
COCMIDRAFT_99367
Bipolaris oryzae
COCMIDRAFT_99367
N
COCSADRAFT_312964
Bipolaris sorokiniana
COCSADRAFT_312964
N
COCVIDRAFT_40098
Bipolaris victoriae
COCVIDRAFT_40098
N
COCCADRAFT_88870
Bipolaris zeicola
COCCADRAFT_88870
N
PVAR5_2411
Byssochlamys spectabilis
PVAR5_2411
N
A1O1_03621
Capronia coronata
A1O1_03621
N
A1O3_07261
Capronia epimyces
A1O3_07261
N
PV04_05906
Capronia semiimmersa
PV04_05906
N
Z519_07787
Cladophialophora bantiana
Z519_07787
N
G647_09706
Cladophialophora carrionii
G647_09706
N
PV07_04349
Cladophialophora immunda
PV07_04349
N
A1O5_07945
Cladophialophora psammophila
A1O5_07945
N
A1O7_05540
Cladophialophora yegresii
A1O7_05540
N
CPC735_062890
Coccidioides posadasii
CPC735_062890
N
CCM_05346
Cordyceps militaris
CCM_05346
N
HMPREF1541_01199
Cyphellophora europaea
HMPREF1541_01199
N
H072_1109
Dactylellina haptotyla
H072_1109
N
DRE_03316
Drechslerella stenobrocha
DRE_03316
N
A1O9_03728
Exophiala aquamarina
A1O9_03728
N
HMPREF1120_01168
Exophiala dermatitidis
HMPREF1120_01168
N
PV10_06983
Exophiala mesophila
PV10_06983
N
PV06_01163
Exophiala oligosperma
PV06_01163
N
PV05_04590
Exophiala xenobiotica
PV05_04590
N
Z517_04112
Fonsecaea pedrosoi
Z517_04112
N
FFUJ_05016
Fusarium fujikuroi
FFUJ_05016
N
FPSE_11291
Fusarium pseudograminearum
FPSE_11291
N
CMQ_5248
Grosmannia clavigera
CMQ_5248
N
LEMA_P057000.1
Leptosphaeria maculans
LEMA_P057000.1
N
MCYG_02584
Microsporum canis
MCYG_02584
N
MGYG_08293
Microsporum gypseum
MGYG_08293
N
PABG_07685
Paracoccidioides brasiliensis
PABG_07685
N
PAAG_12589
Paracoccidioides sp lutzii
PAAG_12589
N
U727_00431202221
Penicillium solitum
U727_00431202221
N
PODANS_6_3560
Podospora anserina
PODANS_6_3560
N
GMDG_04003
Pseudogymnoascus destructans
GMDG_04003
N
SETTUDRAFT_155086
Setosphaeria turcica
SETTUDRAFT_155086
N
S40288_05338
Stachybotrys chartarum
S40288_05338
N
S40285_01002
Stachybotrys chlorohalonata
S40285_01002
N
VHEMI03538
Torrubiella hemipterigena
VHEMI03538
N
TEQG_05658
Trichophyton equinum
TEQG_05658
N
H101_00180
Trichophyton interdigitale
H101_00180
N
TESG_01616
Trichophyton tonsurans
TESG_01616
N
GSTUM_00000679001
Tuber melanosporum
GSTUM_00000679001
N
UREG_02683
Uncinocarpus reesii
UREG_02683
N