CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g143710
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g143710
T199931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g143710.1
GRAS
45
404
LLSLLLQCAEYVATDHLREASILLSEISETCSPFGSSPERVVAYFAQALQARVISTYLSGACSCSQLSESPIPSQKIFAALQTFNSLSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPGLFHILASRPRKLRSIRITGFGPSSDVLASTGRRLADFAASLSLPFEFRPIVGKIGNVTDPSRLGRRPGEAVVVHWMQHRLYDVTGNGIDALEIVRRLRPNLITMVEQELSYDDGGGGCFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLATEIRNIVGGKRRGVMRWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWQ
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_01766
Arthroderma benhamiae
ARB_01766
N
MCYG_02998
Arthroderma otae
MCYG_02998
N
BDDG_03994
Blastomyces dermatitidis
BDDG_03994
N
Bcin14g01990
Botrytis cinerea
Bcin14g01990
N
PVAR5_3926
Byssochlamys spectabilis
PVAR5_3926
N
A1O1_02135
Capronia coronata
A1O1_02135
N
A1O1_09140
Capronia coronata
A1O1_09140
N
PV04_08544
Capronia semiimmersa
PV04_08544
N
PV04_02964
Capronia semiimmersa
PV04_02964
N
Z519_09902
Cladophialophora bantiana
Z519_09902
N
Z519_07334
Cladophialophora bantiana
Z519_07334
N
Z519_05622
Cladophialophora bantiana
Z519_05622
N
G647_05584
Cladophialophora carrionii
G647_05584
N
G647_06990
Cladophialophora carrionii
G647_06990
N
PV07_10971
Cladophialophora immunda
PV07_10971
N
PV07_07329
Cladophialophora immunda
PV07_07329
N
PV07_01329
Cladophialophora immunda
PV07_01329
N
A1O5_08428
Cladophialophora psammophila
A1O5_08428
N
A1O5_10714
Cladophialophora psammophila
A1O5_10714
N
HMPREF1541_03890
Cyphellophora europaea
HMPREF1541_03890
N
EPUS_05889
Endocarpon pusillum
EPUS_05889
N
A1O9_09960
Exophiala aquamarina
A1O9_09960
N
PV10_03696
Exophiala mesophila
PV10_03696
N
PV06_08945
Exophiala oligosperma
PV06_08945
N
PV11_08912
Exophiala sideris
PV11_08912
N
PV08_09443
Exophiala spinifera
PV08_09443
N
PV05_01157
Exophiala xenobiotica
PV05_01157
N
PV05_10614
Exophiala xenobiotica
PV05_10614
N
Z517_10982
Fonsecaea pedrosoi
Z517_10982
N
Z517_04760
Fonsecaea pedrosoi
Z517_04760
N
M7I_5908
Glarea lozoyensis
M7I_5908
N
HCBG_02977
Histoplasma capsulatum
HCBG_02977
N
MBM_09971
Marssonina brunnea
MBM_09971
N
MCYG_02998
Microsporum canis
MCYG_02998
N
MGYG_00173
Microsporum gypseum
MGYG_00173
N
OIDMADRAFT_112975
Oidiodendron maius
OIDMADRAFT_112975
N
PABG_04230
Paracoccidioides brasiliensis
PABG_04230
N
V499_05613
Pseudogymnoascus pannorum
V499_05613
N
Z518_00552
Rhinocladiella mackenziei
Z518_00552
N
SBOR_8513
Sclerotinia borealis
SBOR_8513
N
SS1G_10244
Sclerotinia sclerotiorum
SS1G_10244
N
TEQG_08268
Trichophyton equinum
TEQG_08268
N
H101_04894
Trichophyton interdigitale
H101_04894
N
H102_08792
Trichophyton rubrum
H102_08792
N
H105_08817
Trichophyton soudanense
H105_08817
N
TESG_07989
Trichophyton tonsurans
TESG_07989
N
TRV_01335
Trichophyton verrucosum
TRV_01335
N
UREG_04562
Uncinocarpus reesii
UREG_04562
N