CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB11G13310
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB11G13310
T200619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB11G13310.1
GRAS
102
464
LSDLLLAGAEAVEAGDSILASIAFLRLDDFLSGVPENSAASSFDRLAYHFDQGLRSRMSSACNGCYQPQPLPSGNMLVHQIIQELSPFVKFANFTTNQAILDATVGDMDVHVVDLNIGEGIQWSSLMSDLARCGGKSFRLTTVTGDCNDSTHDTAVRLLSEFAESLELPFQYNSIFMHNEEELHAFSEDCKGSVIVSCDTTSLYYKPLSTLQNVLLVFVKKLQPKLVVTVEEDLVRIGRGASPFSTCFVEFFFEALHHFTTVFESLASCFSGSNYETCLRLVEMELMGPRIQDFVGNYGSVRVEANASEVLEGFRACELSACNIAQARMLVGLFNRVFGVVCEKGRLALCWKSRPLISVSVWI
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA11G0036600
Oryza glaberrima
ORGLA11G0036600
N
0.823
OGLUM11G03650
Oryza glumaepatula
OGLUM11G03650
N
0.799
BGIOSGA034855
Oryza indica
BGIOSGA034855
N
0.853
OLONG_001597
Oryza longistaminata
OLONG_001597
N
0.797
OMERI11G03580
Oryza meridionalis
OMERI11G03580
N
0.802
ONIVA11G04040
Oryza nivara
ONIVA11G04040
N
0.776
ORUFI11G03860
Oryza rufipogon
ORUFI11G03860
N
0.799
OS11G0160550
Oryza sativa
OS11G0160550
N
0.859