CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART05G21830
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART05G21830
T200655_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART05G21830.1
GRAS
36
105
IQQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPSQRLTSWLLRALVARACRLCAAAPAGAPWSSGE
OBART05G21830.1
GRAS
130
380
PPRPGGAPAIRITVPSVRPAVPPLLAVSSSELGARLAIFAKSKGVQLEFNVVESATTTSPKKTSTTLCQELASVLSDPPSLGLRDGEAVVVNCQSWLRHVAPDTRDLFLDTVRALNPCLVTVTDEDADLGSPSLASRMAGCFDFHWILLDALDMSAPKDSPRRLEQEAAVGRKIESVIGEEDGAERSEPGARLAERMSRKGFAGVVFDEEAAAEVRRLLSEHATGWGVKREDDMLVLTWKGHAAVFTGAWT
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_16091
Aegilops tauschii
F775_16091
N
0.795
ORGLA05G0190100
Oryza glaberrima
ORGLA05G0190100
N
0.762
OGLUM05G23020
Oryza glumaepatula
OGLUM05G23020
N
0.758
BGIOSGA020123
Oryza indica
BGIOSGA020123
N
0.758
OLONG_006513
Oryza longistaminata
OLONG_006513
N
0.755
OMERI05G19700
Oryza meridionalis
OMERI05G19700
N
0.762
OPUNC05G19420
Oryza punctata
OPUNC05G19420
N
0.722
ORUFI05G23090
Oryza rufipogon
ORUFI05G23090
N
0.762
OS05G0500600
Oryza sativa
OS05G0500600
N
0.758
TRIUR3_31129
Triticum urartu
TRIUR3_31129
N
0.762