CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_003059
(
Oryza longistaminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OLONG_003059
T200749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_003059-R1
GRAS
355
728
LRNLLIHCAQAVAADNRISASELVKKIRQHSSPDGDSNQRLAFYLVDGLEARLAGIGSQVYRKLMASRTSAESLLKAYSLYLSACPFERASFAYANRTILDASKGQQPRKVHIVHFGICAGFQWPSLIQRLANEEGGPPKLRITGIDMPQPGFHPCEIIEETGKRLADYANLFKVPFQYQGIASRWETVQIEDLNIDKDEVLIVNCMFRMKNLGDEMVSMNSARDRVLKIMRMMNPRVFILGIVNGSYSSPFFITRFKEVLFHFSSLFDMIDANVPRDNEARKMIERGLFGQEALNIIACEGAERTERPESYKQWQARCLKAGFKQLPVDPDTLKKIINMKKGIYHEDFVADEDGGWLLQGWKGRVIYAISTWK
Links
Other
GRAS
family TFs
Other
Oryza longistaminata
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0008_2302
Arabidopsis lyrata
Al_scaffold_0008_2302
I
TRFL5
Arabidopsis lyrata
fgenesh2_kg.1__1721__AT1G15720.1
I
TRFL5
Arabidopsis thaliana
AT1G15720
D
AT5G58340
Arabidopsis thaliana
AT5G58340
I
Bostr.7128s0187
Boechera stricta
Bostr.7128s0187
I
Bo9g134990
Brassica oleracea
Bo9g134990
I
Bra039470
Brassica rapa
Bra039470
I
Cagra.2238s0052
Capsella grandiflora
Cagra.2238s0052
I
Carubv10011791m.g
Capsella rubella
Carubv10011791m.g
I
Thhalv10013531m.g
Eutrema salsugineum
Thhalv10013531m.g
I
Thhalv10022421m.g
Eutrema salsugineum
Thhalv10022421m.g
I