CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0001s44090
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0001s44090
T201172_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0001s44090.1
GRAS
213
583
LKQLLIACAKALAENNVSAFDNLTEKARSVVSISGEPIQRLGAYLIEGLVARKESSGANIYRTLKCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEAVARRLSAISEKFNIPVEFHGVPVFAPDVTKEMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMIKSFNPKVVTLVEQESNTNTTPFVTRFVETLNYYLAMFESIDVTLPRDRKERISVEQHCLARDMVNVIACEGKERVERHELFRKWKSRFMMAGFQQYPLSTYVNSVIKSLLRTYSEHYTLVENDGAMLLGWKDRNLISASAWH
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_00663
Ancylostoma ceylanicum
ANCCEY_00663
N
0.000
ASU_02611
Ascaris suum
ASU_02611
N
0.000
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
0.000
nDi.2.2.2.g07634
Dirofilaria immitis
nDi.2.2.2.g07634
N
0.000
GPUH_0001628601
Gongylonema pulchrum
GPUH_0001628601
N
0.000
nLs.2.1.2.g07567
Litomosoides sigmodontis
nLs.2.1.2.g07567
N
0.000
LOAG_08235
Loa loa
LOAG_08235
N
0.000
YBX1
Loxodonta africana
ENSLAFG00000031170
I
0.000
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.000
OFLC_0001050101
Onchocerca flexuosa
OFLC_0001050101
N
0.000
nOo.2.0.1.g05364
Onchocerca ochengi
nOo.2.0.1.g05364
N
0.000
WBGene00246599
Onchocerca volvulus
WBGene00246599
N
0.000
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.000
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
0.000
TELCIR_12880
Teladorsagia circumcincta
TELCIR_12880
N
0.000
TCNE_0001553801
Toxocara canis
TCNE_0001553801
N
0.000
WUBG_17286
Wuchereria bancrofti
WUBG_17286
N
0.000