CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s11020
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0003s11020
T201182_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s11020.1
GRAS
390
752
LLDQLYKAAELVGTGNFSHAQGILARLNQQLFPTGKPLHRAAFYFKEALQLLILMNNNSVTAPPPRSPTPFDVIFKMSAYKVLSEVSPLIQFVNFTCNQALLEAVDDADRIHIVDFDIGFGAQWASFMQELPRNRGGRSLKTTAFASPSTHHPVELSLMRDNLTQFANEIGLSFELDVINFDSLEQHCYSLPFFRTSEHEAVVVNFPIWCSSNQPSALPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHILHALQSYTHLLESLDAVNATTDDVNKIERFLLQPRIESTVLGRLRATDKMPNWKTIFASAGFSPVTFSNFTETQAECVVKRTPVRGFHVERQQALLVLFWQRRELMSASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_010_00154
Aquilegia coerulea
Aquca_010_00154
N
0.000
Ca_02143
Cicer arietinum
Ca_02143
N
0.000
Ca_06067
Cicer arietinum
Ca_06067
N
0.000
Cucsa.078220
Cucumis sativus
Cucsa.078220
N
0.000
Gorai.001G233700
Gossypium raimondii
Gorai.001G233700
N
0.000
Gorai.007G154900
Gossypium raimondii
Gorai.007G154900
N
0.000
MDP0000155725
Malus domestica
MDP0000155725
N
0.000
PRUPE_ppa010055mg
Prunus persica
PRUPE_ppa010055mg
N
0.000
TCM_002925
Theobroma cacao
TCM_002925
N
0.000
VIT_07s0005g06670
Vitis vinifera
VIT_07s0005g06670
N
0.000