Cucsa.078220 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.078220 T250479_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.078220.1 MADF 36 119

Links

Other MADF family TFs
Other Cucumis sativus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla015186 Citrullus lanatus Cla015186 N 0.956
MDP0000155725 Malus domestica MDP0000155725 N 0.904
PRUPE_ppa010055mg Prunus persica PRUPE_ppa010055mg N 0.897
Ca_06067 Cicer arietinum Ca_06067 N 0.869
Gorai.001G233700 Gossypium raimondii Gorai.001G233700 N 0.868
Ca_02143 Cicer arietinum Ca_02143 N 0.867
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.849
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.847
29709.m001180 Ricinus communis 29709.m001180 N 0.847
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.845
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.845
Bo4g023990 Brassica oleracea Bo4g023990 N 0.839
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.837
TCM_002925 Theobroma cacao TCM_002925 N 0.834
Gorai.007G154900 Gossypium raimondii Gorai.007G154900 N 0.833
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.827
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.827
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.826
Bra000360 Brassica rapa Bra000360 N 0.813
Bo3g037360 Brassica oleracea Bo3g037360 N 0.813
Bra004859 Brassica rapa Bra004859 N 0.812