Bra004859 (Brassica rapa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bra004859 T248012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004859.1-P MADF 54 135

Links

Other MADF family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g023990 Brassica oleracea Bo4g023990 N 0.954
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.922
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.922
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.920
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.920
Bo3g037360 Brassica oleracea Bo3g037360 N 0.914
Bra000360 Brassica rapa Bra000360 N 0.914
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.910
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.894
29709.m001180 Ricinus communis 29709.m001180 N 0.890
MDP0000557282 Malus domestica MDP0000557282 N 0.874
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.872
Cla021714 Citrullus lanatus Cla021714 N 0.865
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.865
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.860
mgf005560m Mimulus guttatus mgf005560m N 0.858
PK17306.1 Cannabis sativa PK17306.1 N 0.856
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.855
Ca_06067 Cicer arietinum Ca_06067 N 0.847
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.846
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.845
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.845
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.841
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.836
OBART10G18780 Oryza barthii OBART10G18780 N 0.836
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.836
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.836
ONIVA10G21280 Oryza nivara ONIVA10G21280 N 0.836
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.836
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.836
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.836
OS10G0564200 Oryza sativa OS10G0564200 N 0.836
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.836
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.833
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.832
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.827
Ca_06795 Cicer arietinum Ca_06795 N 0.827
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.825
Pavir.Ib02309 Panicum virgatum Pavir.Ib02309 N 0.819
BRADI3G38680 Brachypodium distachyon BRADI3G38680 N 0.816
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.812