PGSC0003DMG400001696 (Solanum tuberosum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PGSC0003DMG400001696 T249616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400004269 MADF 46 131

Links

Other MADF family TFs
Other Solanum tuberosum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.966
mgf005560m Mimulus guttatus mgf005560m N 0.909
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.867
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.857
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.844
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.841
Ca_06795 Cicer arietinum Ca_06795 N 0.840
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.838
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.838
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.834
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.834
OBART10G18780 Oryza barthii OBART10G18780 N 0.834
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.834
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.834
ONIVA10G21280 Oryza nivara ONIVA10G21280 N 0.834
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.834
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.834
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.834
OS10G0564200 Oryza sativa OS10G0564200 N 0.834
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.834
29709.m001180 Ricinus communis 29709.m001180 N 0.832
Bra004859 Brassica rapa Bra004859 N 0.825
Pavir.Ib02309 Panicum virgatum Pavir.Ib02309 N 0.817
MDP0000557282 Malus domestica MDP0000557282 N 0.814