Solyc01g088820.2 (Solanum lycopersicum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Solyc01g088820.2 T249881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g088820.2.1 MADF 46 131

Links

Other MADF family TFs
Other Solanum lycopersicum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.966
mgf005560m Mimulus guttatus mgf005560m N 0.922
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.876
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.866
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.853
Ca_06795 Cicer arietinum Ca_06795 N 0.850
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.850
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.850
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.848
29709.m001180 Ricinus communis 29709.m001180 N 0.848
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.848
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.844
Bra004859 Brassica rapa Bra004859 N 0.836
OS10G0564200 Oryza sativa OS10G0564200 N 0.828
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.828
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.828
OBART10G18780 Oryza barthii OBART10G18780 N 0.828
ONIVA10G21280 Oryza nivara ONIVA10G21280 N 0.828
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.828
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.828
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.828
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.828
MDP0000557282 Malus domestica MDP0000557282 N 0.825
Bo4g023990 Brassica oleracea Bo4g023990 N 0.820
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.812
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.812