orange1.1g018620m.g (Citrus sinensis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 orange1.1g018620m.g T250797_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018620m MADF 51 134

Links

Other MADF family TFs
Other Citrus sinensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.971
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.960
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.959
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.956
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.955
MDP0000557282 Malus domestica MDP0000557282 N 0.951
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.945
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.944
Ca_06795 Cicer arietinum Ca_06795 N 0.944
TCM_005773 Theobroma cacao TCM_005773 N 0.943
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.943
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.941
29709.m001180 Ricinus communis 29709.m001180 N 0.939
PK17306.1 Cannabis sativa PK17306.1 N 0.933
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.928
Cla021714 Citrullus lanatus Cla021714 N 0.925
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.925
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.918
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.911
Ca_06067 Cicer arietinum Ca_06067 N 0.907
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.891
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.891
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.891
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.891
Bo3g037360 Brassica oleracea Bo3g037360 N 0.887
Bra000360 Brassica rapa Bra000360 N 0.887
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.886
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.886
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.886
GLYMA19G29640 Glycine max GLYMA19G29640 N 0.885
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.872
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.862
mgf005560m Mimulus guttatus mgf005560m N 0.856
Bo4g023990 Brassica oleracea Bo4g023990 N 0.852
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.846
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.846
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.830
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.812