CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g117990
(
Medicago truncatula
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
MTR_4g117990
T249462_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH32255
MADF
54
135
DSYREKWYSLGRGNLKATHWQEVADSVSNRCPNVTPAKTPVQCRHKMEKLRKRYRTEIQRARSLPHSRFNSAWVHFKLMDSM
Links
Other
MADF
family TFs
Other
Medicago truncatula
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G05630
Glycine max
GLYMA08G05630
N
0.950
Ca_06795
Cicer arietinum
Ca_06795
N
0.950
PK17306.1
Cannabis sativa
PK17306.1
N
0.931
MDP0000557282
Malus domestica
MDP0000557282
N
0.928
Ciclev10020863m.g
Citrus clementina
Ciclev10020863m.g
N
0.918
orange1.1g018620m.g
Citrus sinensis
orange1.1g018620m.g
N
0.918
TCM_005773
Theobroma cacao
TCM_005773
N
0.916
Gorai.004G167100
Gossypium raimondii
Gorai.004G167100
N
0.916
Cla021714
Citrullus lanatus
Cla021714
N
0.914
Cucsa.256710
Cucumis sativus
Cucsa.256710
N
0.914
chr4.CM0739.40.nd
Lotus japonicus
chr4.CM0739.40.nd
N
0.912
gene05318-v1.0-hybrid
Fragaria vesca
gene05318-v1.0-hybrid
N
0.908
GLYMA09G38050
Glycine max
GLYMA09G38050
N
0.907
29709.m001180
Ricinus communis
29709.m001180
N
0.907
POPTR_0002s14030
Populus trichocarpa
POPTR_0002s14030
N
0.903
Ca_06067
Cicer arietinum
Ca_06067
N
0.903
GLYMA18G48343
Glycine max
GLYMA18G48343
N
0.898
evm.TU.supercontig_41.83
Carica papaya
evm.TU.supercontig_41.83
N
0.896
cassava12982.valid.m1
Manihot esculenta
cassava12982.valid.m1
N
0.895
POPTR_0014s05010
Populus trichocarpa
POPTR_0014s05010
N
0.893
SapurV1A.0033s0070
Salix purpurea
SapurV1A.0033s0070
N
0.893
GLYMA19G29640
Glycine max
GLYMA19G29640
N
0.863
Thhalv10001488m.g
Eutrema salsugineum
Thhalv10001488m.g
N
0.863
Bo3g037360
Brassica oleracea
Bo3g037360
N
0.859
Bra000360
Brassica rapa
Bra000360
N
0.859
Cagra.0239s0022
Capsella grandiflora
Cagra.0239s0022
N
0.859
Carubv10025047m.g
Capsella rubella
Carubv10025047m.g
N
0.859
AT2G44730
Arabidopsis thaliana
AT2G44730
N
0.856
fgenesh2_kg.4__2662__AT2G44730.1
Arabidopsis lyrata
fgenesh2_kg.4__2662__AT2G44730.1
N
0.856
MTR_7g081190
Medicago truncatula
MTR_7g081190
N
0.856
Bostr.25993s0300
Boechera stricta
Bostr.25993s0300
N
0.856
Solyc01g088820.2
Solanum lycopersicum
Solyc01g088820.2
N
0.850
VIT_15s0021g01220
Vitis vinifera
VIT_15s0021g01220
N
0.840
PGSC0003DMG400001696
Solanum tuberosum
PGSC0003DMG400001696
N
0.834
Bra004859
Brassica rapa
Bra004859
N
0.833
Bo4g023990
Brassica oleracea
Bo4g023990
N
0.817
Aquca_010_00154
Aquilegia coerulea
Aquca_010_00154
N
0.813