CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_06s0004g04980
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_06s0004g04980
T201824_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g04980.t01
GRAS
328
699
LRALLTQCAQALAGSNLRSANDLLKMIRQHSSPCGDGVQRLAHFFANSLEARLSGTGLEMSKALVRKRTPAGDIIKAYRLYVTVCPLRRMSHKFANRTMAKLAERETRLHIIDFGILYGFQWPCLIQLLSSRPGGPPKLRITGIDHPQPGFRPEERVEETGRRLANYCDRFNVPFEYKAIAQKWDTIRLEDLKIEKDEVVVVNCLYRLKNLLDETVVANSPRDAVLKLIREINPAVFIHGVVNGTFNAPFFVTRFRESLFHYDTLFDMFEATVPREDQERMLFEREIFGMDIMNIIACEGSERFERPETYKQWQIRNVRAGLRQLPLDQEIVTNVRSTVKLDYHKDFVVDEDGGWMLQGWKGRIIYAISCWK
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_32183
Aegilops tauschii
F775_32183
I
AMTR_s00077p00070990
Amborella trichopoda
AMTR_s00077p00070990
I
Aquca_004_00525
Aquilegia coerulea
Aquca_004_00525
I
Aquca_045_00222
Aquilegia coerulea
Aquca_045_00222
I
AtbZIP52
Arabidopsis lyrata
Al_scaffold_0001_623
I
fgenesh2_kg.4__2179__AT2G40620.1
Arabidopsis lyrata
fgenesh2_kg.4__2179__AT2G40620.1
I
BZIP18
Arabidopsis thaliana
AT2G40620
D
AtbZIP52
Arabidopsis thaliana
AT1G06850
D
Bostr.9345s0072
Boechera stricta
Bostr.9345s0072
I
Bostr.25219s0275
Boechera stricta
Bostr.25219s0275
I
Bo4g012700
Brassica oleracea
Bo4g012700
I
Bo4g190320
Brassica oleracea
Bo4g190320
I
Bo8g007220
Brassica oleracea
Bo8g007220
I
Bo8g114410
Brassica oleracea
Bo8g114410
I
Bra004582
Brassica rapa
Bra004582
I
Bra016980
Brassica rapa
Bra016980
I
Bra030663
Brassica rapa
Bra030663
I
Bra031541
Brassica rapa
Bra031541
I
PK00315.1
Cannabis sativa
PK00315.1
D
PK16335.1
Cannabis sativa
PK16335.1
D
Cagra.1671s0308
Capsella grandiflora
Cagra.1671s0308
I
Cagra.1642s0027
Capsella grandiflora
Cagra.1642s0027
I
Carubv10025182m.g
Capsella rubella
Carubv10025182m.g
I
Carubv10009673m.g
Capsella rubella
Carubv10009673m.g
I
evm.TU.supercontig_2.298
Carica papaya
evm.TU.supercontig_2.298
I
Ca_15657
Cicer arietinum
Ca_15657
I
Ca_08929
Cicer arietinum
Ca_08929
I
Ca_04108
Cicer arietinum
Ca_04108
I
Cla013626
Citrullus lanatus
Cla013626
I
Cla007409
Citrullus lanatus
Cla007409
I
Ciclev10032076m.g
Citrus clementina
Ciclev10032076m.g
I
orange1.1g020026m.g
Citrus sinensis
orange1.1g020026m.g
I
Cucsa.118900
Cucumis sativus
Cucsa.118900
I
Cucsa.143950
Cucumis sativus
Cucsa.143950
I
Eucgr.G03135
Eucalyptus grandis
Eucgr.G03135
I
Eucgr.J00119
Eucalyptus grandis
Eucgr.J00119
I
Thhalv10016819m.g
Eutrema salsugineum
Thhalv10016819m.g
I
Thhalv10008146m.g
Eutrema salsugineum
Thhalv10008146m.g
I
gene28103-v1.0-hybrid
Fragaria vesca
gene28103-v1.0-hybrid
I
gene21344-v1.0-hybrid
Fragaria vesca
gene21344-v1.0-hybrid
I
GLYMA02G40270
Glycine max
GLYMA02G40270
I
GLYMA04G40010
Glycine max
GLYMA04G40010
N
GLYMA11G30940
Glycine max
GLYMA11G30940
I
GLYMA14G38460
Glycine max
GLYMA14G38460
I
GLYMA18G05880
Glycine max
GLYMA18G05880
I
MLOC_44311
Hordeum vulgare
MLOC_44311
I
MLOC_60045
Hordeum vulgare
MLOC_60045
I
LPERR03G14390
Leersia perrieri
LPERR03G14390
I
Lus10009907.g
Linum usitatissimum
Lus10009907.g
I
Lus10042211.g
Linum usitatissimum
Lus10042211.g
I
Lus10008605.g
Linum usitatissimum
Lus10008605.g
I
MDP0000129203
Malus domestica
MDP0000129203
I
MDP0000210251
Malus domestica
MDP0000210251
I
MDP0000297791
Malus domestica
MDP0000297791
I
MDP0000305387
Malus domestica
MDP0000305387
I
cassava43674.valid.m1
Manihot esculenta
cassava43674.valid.m1
I
MTR_3g467120
Medicago truncatula
MTR_3g467120
I
MTR_5g075390
Medicago truncatula
MTR_5g075390
I
mgf007830m
Mimulus guttatus
mgf007830m
I
GSMUA_AchrUn_randomG14020_001
Musa acuminata
GSMUA_AchrUn_randomG14020_001
I
GSMUA_Achr2G18830_001
Musa acuminata
GSMUA_Achr2G18830_001
I
GSMUA_Achr11G23650_001
Musa acuminata
GSMUA_Achr11G23650_001
I
OBART07G26390
Oryza barthii
OBART07G26390
I
OGLUM07G26420
Oryza glumaepatula
OGLUM07G26420
I
BGIOSGA023710
Oryza indica
BGIOSGA023710
I
BGIOSGA012577
Oryza indica
BGIOSGA012577
I
OMERI03G14760
Oryza meridionalis
OMERI03G14760
I
ONIVA03G17500
Oryza nivara
ONIVA03G17500
I
ONIVA07G26100
Oryza nivara
ONIVA07G26100
I
OPUNC03G15960
Oryza punctata
OPUNC03G15960
I
OPUNC07G24840
Oryza punctata
OPUNC07G24840
I
ORUFI03G17050
Oryza rufipogon
ORUFI03G17050
I
RF2B
Oryza sativa
OS03G0336200
I
Pavir.Ib01574
Panicum virgatum
Pavir.Ib01574
I
Pavir.Bb03755
Panicum virgatum
Pavir.Bb03755
I
POPTR_0013s15280
Populus trichocarpa
POPTR_0013s15280
I
POPTR_0019s15040
Populus trichocarpa
POPTR_0019s15040
I
Pm019060
Prunus mume
Pm019060
I
Pm000251
Prunus mume
Pm000251
I
PRUPE_ppa007645mg
Prunus persica
PRUPE_ppa007645mg
I
PRUPE_ppa006097mg
Prunus persica
PRUPE_ppa006097mg
I
29804.m001495
Ricinus communis
29804.m001495
I
SapurV1A.3480s0020
Salix purpurea
SapurV1A.3480s0020
I
SapurV1A.0215s0230
Salix purpurea
SapurV1A.0215s0230
I
Si036380m.g
Setaria italica
Si036380m.g
I
Si030224m.g
Setaria italica
Si030224m.g
I
Solyc06g048630.2
Solanum lycopersicum
Solyc06g048630.2
I
PGSC0003DMG400027599
Solanum tuberosum
PGSC0003DMG400027599
I
PGSC0003DMG400016651
Solanum tuberosum
PGSC0003DMG400016651
I
TCM_042286
Theobroma cacao
TCM_042286
I
TCM_045524
Theobroma cacao
TCM_045524
I
Traes_4AS_45B416B25
Triticum aestivum
Traes_4AS_45B416B25
I
Traes_4DL_19DC0CA31
Triticum aestivum
Traes_4DL_19DC0CA31
I
Traes_4BL_9422485B3
Triticum aestivum
Traes_4BL_9422485B3
I
Traes_2DS_93EAEC654
Triticum aestivum
Traes_2DS_93EAEC654
I
Traes_2BS_1B0F27580
Triticum aestivum
Traes_2BS_1B0F27580
I
AtbZIP52
Vitis vinifera
VIT_06s0004g08070
I
VIT_13s0067g02900
Vitis vinifera
VIT_13s0067g02900
I
GRMZM2G151295
Zea mays
GRMZM2G151295
I
GRMZM2G062391
Zea mays
GRMZM2G062391
I