Cagra.1642s0027 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.1642s0027 T071492_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.846 1.000
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.846 1.000
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.846 1.000
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.831 0.935
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.831 0.935
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.817 0.871
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.817 0.871
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1642s0027.1.p bZIP 148 209

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP18 Arabidopsis thaliana AT2G40620 D 0.846
Bo4g012700 Brassica oleracea Bo4g012700 I 0.846
Bra004582 Brassica rapa Bra004582 I 0.846
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I 0.846
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I 0.846
Carubv10025182m.g Capsella rubella Carubv10025182m.g I 0.846
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I 0.846
Si030224m.g Setaria italica Si030224m.g I 0.844
TCM_045524 Theobroma cacao TCM_045524 I 0.844
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I 0.844
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I 0.844
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I 0.833
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.831
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.831
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.831
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.831
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.831
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.831
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.831
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.831
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.831
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.831
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.831
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.831
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.831
OBART07G26390 Oryza barthii OBART07G26390 I 0.831
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.831
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.831
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.831
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.831
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.831
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.831
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.831
RF2B Oryza sativa OS03G0336200 I 0.831
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.831
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.831
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.831
Si036380m.g Setaria italica Si036380m.g I 0.831
TCM_042286 Theobroma cacao TCM_042286 I 0.831
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I 0.831
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.831
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.831
Ca_08929 Cicer arietinum Ca_08929 I 0.831
Ca_15657 Cicer arietinum Ca_15657 I 0.831
Cla007409 Citrullus lanatus Cla007409 I 0.831
Cla013626 Citrullus lanatus Cla013626 I 0.831
Pm000251 Prunus mume Pm000251 I 0.831
Pm019060 Prunus mume Pm019060 I 0.831
29804.m001495 Ricinus communis 29804.m001495 I 0.831
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.831
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.831
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.831
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I 0.831
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.831
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.831
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.831
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.831
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.831
MDP0000129203 Malus domestica MDP0000129203 I 0.831
MDP0000210251 Malus domestica MDP0000210251 I 0.831
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.831
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.831
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.831
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.831
PK00315.1 Cannabis sativa PK00315.1 D 0.831
PK16335.1 Cannabis sativa PK16335.1 D 0.831
29729.m002363 Ricinus communis 29729.m002363 I 0.830
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I 0.830
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I 0.830
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I 0.830
Lus10012881.g Linum usitatissimum Lus10012881.g I 0.830
Lus10030531.g Linum usitatissimum Lus10030531.g I 0.830
Bo4g190320 Brassica oleracea Bo4g190320 I 0.826
Bra016980 Brassica rapa Bra016980 I 0.826
F775_32183 Aegilops tauschii F775_32183 I 0.820
GRMZM2G062391 Zea mays GRMZM2G062391 I 0.820
MLOC_60045 Hordeum vulgare MLOC_60045 I 0.820
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I 0.820
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I 0.820
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I 0.820
mgf007830m Mimulus guttatus mgf007830m I 0.820
MDP0000297791 Malus domestica MDP0000297791 I 0.820
MDP0000305387 Malus domestica MDP0000305387 I 0.820
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.817
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.817
Bo8g007220 Brassica oleracea Bo8g007220 I 0.817
Bo8g114410 Brassica oleracea Bo8g114410 I 0.817
Bra030663 Brassica rapa Bra030663 I 0.817
Bra031541 Brassica rapa Bra031541 I 0.817
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.817
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.817
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.817
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.817
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.817
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.817
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.817
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.817
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.817
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.817
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.817
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.817
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I 0.810
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I 0.807
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I 0.800
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I 0.792
MTR_3g094020 Medicago truncatula MTR_3g094020 I 0.791
Ca_04108 Cicer arietinum Ca_04108 I 0.791
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I 0.791
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I 0.791
BRADI1G17700 Brachypodium distachyon BRADI1G17700 I 0.787
GRMZM2G149040 Zea mays GRMZM2G149040 I 0.787
Sb02g042990 Sorghum bicolor Sb02g042990 I 0.787
Pavir.Ba00224 Panicum virgatum Pavir.Ba00224 I 0.787
F775_31774 Aegilops tauschii F775_31774 I 0.783
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I 0.783
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I 0.783