29729.m002363 (Ricinus communis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 29729.m002363 T070509_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.830 0.935
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.830 0.935
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.830 0.935
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.819 0.952
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.819 0.935
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.814 0.887
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.814 0.887
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29729.m002363 bZIP 153 214

Links

Other bZIP family TFs
Other Ricinus communis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I 0.851
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I 0.851
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I 0.851
Lus10012881.g Linum usitatissimum Lus10012881.g I 0.851
Lus10030531.g Linum usitatissimum Lus10030531.g I 0.851
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.838
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.838
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.838
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.838
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.838
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.838
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.837
Si030224m.g Setaria italica Si030224m.g I 0.832
TCM_045524 Theobroma cacao TCM_045524 I 0.832
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I 0.832
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I 0.832
BZIP18 Arabidopsis thaliana AT2G40620 D 0.830
Bo4g012700 Brassica oleracea Bo4g012700 I 0.830
Bra004582 Brassica rapa Bra004582 I 0.830
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I 0.830
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I 0.830
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I 0.830
Carubv10025182m.g Capsella rubella Carubv10025182m.g I 0.830
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I 0.830
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I 0.830
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I 0.828
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.819
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.819
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.819
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.819
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.819
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.819
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.819
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.819
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.819
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.819
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.819
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.819
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.819
OBART07G26390 Oryza barthii OBART07G26390 I 0.819
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.819
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.819
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.819
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.819
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.819
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.819
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.819
RF2B Oryza sativa OS03G0336200 I 0.819
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.819
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.819
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.819
Si036380m.g Setaria italica Si036380m.g I 0.819
TCM_042286 Theobroma cacao TCM_042286 I 0.819
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.819
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.819
Ca_08929 Cicer arietinum Ca_08929 I 0.819
Ca_15657 Cicer arietinum Ca_15657 I 0.819
Cla007409 Citrullus lanatus Cla007409 I 0.819
Cla013626 Citrullus lanatus Cla013626 I 0.819
Pm000251 Prunus mume Pm000251 I 0.819
Pm019060 Prunus mume Pm019060 I 0.819
29804.m001495 Ricinus communis 29804.m001495 I 0.819
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.819
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.819
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.819
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I 0.819
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.819
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.819
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.819
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.819
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.819
MDP0000129203 Malus domestica MDP0000129203 I 0.819
MDP0000210251 Malus domestica MDP0000210251 I 0.819
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.819
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.819
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.819
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.819
PK00315.1 Cannabis sativa PK00315.1 D 0.819
PK16335.1 Cannabis sativa PK16335.1 D 0.819
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I 0.817
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I 0.816
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.814
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.814
Bo8g007220 Brassica oleracea Bo8g007220 I 0.814
Bo8g114410 Brassica oleracea Bo8g114410 I 0.814
Bra030663 Brassica rapa Bra030663 I 0.814
Bra031541 Brassica rapa Bra031541 I 0.814
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.814
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.814
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.814
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.814
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.814
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I 0.812
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I 0.812
Bo4g190320 Brassica oleracea Bo4g190320 I 0.811
Bra016980 Brassica rapa Bra016980 I 0.811
F775_32183 Aegilops tauschii F775_32183 I 0.808
GRMZM2G062391 Zea mays GRMZM2G062391 I 0.808
MLOC_60045 Hordeum vulgare MLOC_60045 I 0.808
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I 0.808
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I 0.808
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I 0.808
mgf007830m Mimulus guttatus mgf007830m I 0.808
MDP0000297791 Malus domestica MDP0000297791 I 0.808
MDP0000305387 Malus domestica MDP0000305387 I 0.808
BRADI1G17700 Brachypodium distachyon BRADI1G17700 I 0.789
GRMZM2G149040 Zea mays GRMZM2G149040 I 0.789
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I 0.789
Sb02g042990 Sorghum bicolor Sb02g042990 I 0.789
Pavir.Ba00224 Panicum virgatum Pavir.Ba00224 I 0.789
Gorai.012G014500 Gossypium raimondii Gorai.012G014500 N 0.788
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I 0.787