CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_23936
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_23936
T201899_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_23936
GRAS
149
525
LVHTLLACAEAVGCRDTHQANLLLNKIWSLANPSGDSLQRVSYCFAKGLKCRLSLYPHNNVLSNGTTITKSASSNDVSLITWEKKLEAFKLLYQTTPYIAFGYMAANEAICQASKIKSSIHIIDLRMEHTFQWPSLIRNLASRPEGPPKLRITGFNTNEDNTKKLQTSMSFLVEEASSFGIVLEFCIISEAATPSLLTIENLKLRKGESLVFNSILQLHKYVKESRGYLKEILQSIKKLSPITLTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEATMVRNSAQRMKIERVHFADEICNVVAYEGPDRIERHERVEQWRRQLGRGGFQVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRSIIMASAWQ
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK21020.1
Cannabis sativa
PK21020.1
N
0.800
evm.TU.supercontig_34.30
Carica papaya
evm.TU.supercontig_34.30
N
0.716
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
0.708
GLYMA15G28410
Glycine max
GLYMA15G28410
N
0.785
Gorai.002G110100
Gossypium raimondii
Gorai.002G110100
N
0.710
LjSGA_122341.1
Lotus japonicus
LjSGA_122341.1
N
0.713
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
0.704
MTR_8g442410
Medicago truncatula
MTR_8g442410
N
0.807
Pm011106
Prunus mume
Pm011106
N
0.711
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
0.708
30169.m006306
Ricinus communis
30169.m006306
N
0.701
TCM_033446
Theobroma cacao
TCM_033446
N
0.718