CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla012346
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla012346
T201921_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla012346
GRAS
476
836
LLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWK
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_013750
Acremonium chrysogenum
ACRE_013750
I
AB10636.1
Alternaria brassicicola
AB10636.1
N
AOL_s00076g272
Arthrobotrys oligospora
AOL_s00076g272
N
ARB_01321
Arthroderma benhamiae
ARB_01321
I
MCYG_02230
Arthroderma otae
MCYG_02230
I
fgenesh1_pm.00168_#_452
Aspergillus carbonarius
fgenesh1_pm.00168_#_452
I
fgenesh1_pm.00866_#_274
Aspergillus carbonarius
fgenesh1_pm.00866_#_274
I
ACLA_070410
Aspergillus clavatus
CADACLAG00006808
N
AFUA_2G11460
Aspergillus fumigatus
CADAFUAG00004521
I
ANIA_05870
Aspergillus nidulans
CADANIAG00007168
I
CADANGAG00001855
Aspergillus niger
CADANGAG00001855
N
CADAORAG00008529
Aspergillus oryzae
CADAORAG00008529
N
EURHEDRAFT_513477
Aspergillus ruber
EURHEDRAFT_513477
N
M437DRAFT_14692
Aureobasidium melanogenum
M437DRAFT_14692
I
M438DRAFT_323991
Aureobasidium pullulans
M438DRAFT_323991
I
AUEXF2481DRAFT_24415
Aureobasidium subglaciale
AUEXF2481DRAFT_24415
I
BAUCODRAFT_243073
Baudoinia compniacensis
BAUCODRAFT_243073
N
BBA_01514
Beauveria bassiana
BBA_01514
I
COCC4DRAFT_63629
Bipolaris maydis
COCC4DRAFT_63629
N
COCMIDRAFT_101691
Bipolaris oryzae
COCMIDRAFT_101691
N
COCSADRAFT_170559
Bipolaris sorokiniana
COCSADRAFT_170559
N
COCVIDRAFT_108667
Bipolaris victoriae
COCVIDRAFT_108667
N
COCCADRAFT_34097
Bipolaris zeicola
COCCADRAFT_34097
N
BDDG_09744
Blastomyces dermatitidis
BDDG_09744
I
Bcin07g01630
Botrytis cinerea
Bcin07g01630
N
PVAR5_2500
Byssochlamys spectabilis
PVAR5_2500
I
A1O1_03703
Capronia coronata
A1O1_03703
N
Z519_07868
Cladophialophora bantiana
Z519_07868
N
G647_09620
Cladophialophora carrionii
G647_09620
N
A1O5_08031
Cladophialophora psammophila
A1O5_08031
N
CIMG_08192
Coccidioides immitis
CIMG_08192
I
CPC735_022090
Coccidioides posadasii
CPC735_022090
I
CFIO01_12268
Colletotrichum fioriniae
CFIO01_12268
I
CGGC5_2102
Colletotrichum gloeosporioides
CGGC5_2102
I
GLRG_02776
Colletotrichum graminicola
GLRG_02776
I
CH063_01368
Colletotrichum higginsianum
CH063_01368
N
CSUB01_08743
Colletotrichum sublineola
CSUB01_08743
I
W97_05295
Coniosporium apollinis
W97_05295
N
CCM_04341
Cordyceps militaris
CCM_04341
I
e_gw1.3.1267.1
Cryphonectria parasitica
e_gw1.3.1267.1
I
HMPREF1541_00939
Cyphellophora europaea
HMPREF1541_00939
N
H072_1134
Dactylellina haptotyla
H072_1134
N
DOTSEDRAFT_88360
Dothistroma septosporum
DOTSEDRAFT_88360
N
A1O9_03872
Exophiala aquamarina
A1O9_03872
N
PV06_07091
Exophiala oligosperma
PV06_07091
N
PV06_08173
Exophiala oligosperma
PV06_08173
N
PV11_00424
Exophiala sideris
PV11_00424
N
PV05_05867
Exophiala xenobiotica
PV05_05867
N
Z517_04030
Fonsecaea pedrosoi
Z517_04030
N
FFUJ_04988
Fusarium fujikuroi
FFUJ_04988
I
FGRRES_06160
Fusarium graminearum
FGRRES_06160
I
FOXG_08550
Fusarium oxysporum
FOXG_08550
I
FPSE_02512
Fusarium pseudograminearum
FPSE_02512
I
NechaG103398
Fusarium solani
NechaG103398
I
HCBG_04284
Histoplasma capsulatum
HCBG_04284
N
LEMA_P057360.1
Leptosphaeria maculans
LEMA_P057360.1
N
MPH_05611
Macrophomina phaseolina
MPH_05611
N
MGG_07131
Magnaporthe oryzae
MGG_07131
I
MBM_01678
Marssonina brunnea
MBM_01678
I
MAC_00726
Metarhizium acridum
MAC_00726
N
MAM_03911
Metarhizium album
MAM_03911
N
MANI_020691
Metarhizium anisopliae
MANI_020691
N
MBR_00349
Metarhizium brunneum
MBR_00349
N
MGU_01192
Metarhizium guizhouense
MGU_01192
N
MAJ_01716
Metarhizium majus
MAJ_01716
N
X797_005336
Metarhizium robertsii
X797_005336
N
MCYG_02230
Microsporum canis
MCYG_02230
I
MGYG_02927
Microsporum gypseum
MGYG_02927
I
estExt_fgenesh1_pm.C_chr_50216
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50216
N
estExt_Genewise1Plus.C_chr_11826
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_11826
N
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
Nectria haematococca
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
I
UCRNP2_3613
Neofusicoccum parvum
UCRNP2_3613
N
NFIA_086700
Neosartorya fischeri
CADNFIAG00008233
I
OIDMADRAFT_152619
Oidiodendron maius
OIDMADRAFT_152619
N
OCS_01600
Ophiocordyceps sinensis
OCS_01600
I
F503_05786
Ophiostoma piceae uamh
F503_05786
I
PABG_00737
Paracoccidioides brasiliensis
PABG_00737
I
PAAG_03678
Paracoccidioides sp lutzii
PAAG_03678
I
Pc15g00340
Penicillium chrysogenum
Pc15g00340
N
PDIP_10950
Penicillium digitatum
PDIP_10950
N
PEX1_002010
Penicillium expansum
PEX1_002010
N
PITC_071780
Penicillium italicum
PITC_071780
N
PMAA_014320
Penicillium marneffei
PMAA_014320
N
PMAA_048690
Penicillium marneffei
PMAA_048690
N
PCH_Pc15g00340
Penicillium rubens
PCH_Pc15g00340
N
U727_00433201101
Penicillium solitum
U727_00433201101
N
PFICI_05184
Pestalotiopsis fici
PFICI_05184
I
SNOG_13663
Phaeosphaeria nodorum
SNOG_13663
N
MYCFIDRAFT_216484
Pseudocercospora fijiensis
MYCFIDRAFT_216484
N
GMDG_07447
Pseudogymnoascus destructans
GMDG_07447
N
PTT_11312
Pyrenophora teres
PTT_11312
N
PTRG_11285
Pyrenophora triticirepentis
PTRG_11285
N
Z518_08584
Rhinocladiella mackenziei
Z518_08584
N
SS1G_01353
Sclerotinia sclerotiorum
SS1G_01353
N
SETTUDRAFT_172422
Setosphaeria turcica
SETTUDRAFT_172422
N
SEPMUDRAFT_150864
Sphaerulina musiva
SEPMUDRAFT_150864
N
S40288_06232
Stachybotrys chartarum
S40288_06232
I
S40285_00977
Stachybotrys chlorohalonata
S40285_00977
I
SNOG_13663
Stagonospora nodorum
SNOG_13663
N
PMAA_014320
Talaromyces marneffei
PMAA_014320
N
PMAA_048690
Talaromyces marneffei
PMAA_048690
N
TSTA_038740
Talaromyces stipitatus
TSTA_038740
I
VHEMI03513
Torrubiella hemipterigena
VHEMI03513
I
TRIATDRAFT_34316
Trichoderma atroviride
TRIATDRAFT_34316
I
TRIREDRAFT_55274
Trichoderma reesei
TRIREDRAFT_55274
I
TRIVIDRAFT_28488
Trichoderma virens
TRIVIDRAFT_28488
N
TEQG_05320
Trichophyton equinum
TEQG_05320
I
H101_07358
Trichophyton interdigitale
H101_07358
I
H102_03415
Trichophyton rubrum
H102_03415
I
H105_03436
Trichophyton soudanense
H105_03436
I
TESG_06426
Trichophyton tonsurans
TESG_06426
I
TRV_07383
Trichophyton verrucosum
TRV_07383
I
PV09_03082
Verruconis gallopava
PV09_03082
N
VDAG_08992
Verticillium dahliae
VDAG_08992
I
Mycgr3G100243
Zymoseptoria tritici
Mycgr3G100243
N
Mycgr3G66114
Zymoseptoria tritici
Mycgr3G66114
N