cassava30062.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava30062.valid.m1 T202077_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30062.valid.m1 GRAS 365 727

Links

Other GRAS family TFs
Other Manihot esculenta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HpaG809807 Hyaloperonospora arabidopsidis HpaG809807 N
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I
estExt_fgenesh1_kg.C_2070034 Phytophthora capsici estExt_fgenesh1_kg.C_2070034 N
PITG_14400 Phytophthora infestans PITG_14400 I
PITG_10310 Phytophthora infestans PITG_10310 N
fgenesh_scip_prom.46568.9768 Phytophthora kernoviae fgenesh_scip_prom.46568.9768 N
F443_20671 Phytophthora parasitica F443_20671 I
F443_00625 Phytophthora parasitica F443_00625 N
F443_20702 Phytophthora parasitica F443_20702 I
Phyra80922 Phytophthora ramorum Phyra80922 N
Physo132965 Phytophthora sojae Physo132965 N
Physo138282 Phytophthora sojae Physo138282 N
maker-pag1_scaffold_266-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.7 N
maker-pag1_scaffold_266-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_266-fgenesh-gene-0.3 N
maker-par_contig_2799-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_2799-snap-gene-0.1 N
maker-par_contig_173-fgenesh-gene-0.2 Pythium arrhenomanes maker-par_contig_173-fgenesh-gene-0.2 N
maker-par_contig_4085-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_4085-snap-gene-0.0 N
maker-pir_contig_524-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_524-fgenesh-gene-0.4 N
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I
PYU1_G002839 Pythium ultimum PYU1_G002839 N
PYU1_G002849 Pythium ultimum PYU1_G002849 I
maker-pve_contig_506-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_506-fgenesh-gene-0.3 N
maker-pve_contig_734-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_734-fgenesh-gene-0.2 N