cassava30062.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava30062.valid.m1 T202077_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30062.valid.m1 GRAS 365 727

Links

Other GRAS family TFs
Other Manihot esculenta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29916.m000544 Ricinus communis 29916.m000544 N 0.922
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.895
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.881
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.873
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.870
Pm023512 Prunus mume Pm023512 N 0.859
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.859
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.856
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.856
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.849
Cla005738 Citrullus lanatus Cla005738 N 0.846
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.845
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.837
MDP0000275704 Malus domestica MDP0000275704 N 0.827
TCM_015991 Theobroma cacao TCM_015991 N 0.823
PK22905.1 Cannabis sativa PK22905.1 N 0.823
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.822
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.787
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.784
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.769
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.742
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N 0.721